Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv21A0A0A6YX06 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.71■□□□□ 0.1
Trbv21A0A0A6YX06 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv21A0A0A6YX06 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv21A0A0A6YX06 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv21A0A0A6YX06 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv21A0A0A6YX06 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv21A0A0A6YX06 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 AC154849.3-201ENSMUST00000223733 1660 ntBASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv21A0A0A6YX06 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Gm27463-201ENSMUST00000183569 57 ntBASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv21A0A0A6YX06 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms