Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav6n-6A0A075B6B2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6n-6A0A075B6B2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6n-6A0A075B6B2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm12441-201ENSMUST00000121806 588 ntBASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm26524-201ENSMUST00000192339 390 ntBASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6n-6A0A075B6B2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.64□□□□□ -0.39
Trav6n-6A0A075B6B2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-6A0A075B6B2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms