Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav14d-1A0A075B6B1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav14d-1A0A075B6B1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav14d-1A0A075B6B1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav14d-1A0A075B6B1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav14d-1A0A075B6B1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav14d-1A0A075B6B1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm13401-201ENSMUST00000117074 291 ntBASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm12821-201ENSMUST00000120022 600 ntBASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm6420-201ENSMUST00000193885 723 ntBASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav14d-1A0A075B6B1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav14d-1A0A075B6B1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Gm27454-201ENSMUST00000185090 204 ntBASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav14d-1A0A075B6B1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav14d-1A0A075B6B1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav14d-1A0A075B6B1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav14d-1A0A075B6B1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav14d-1A0A075B6B1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14d-1A0A075B6B1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14d-1A0A075B6B1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav14d-1A0A075B6B1 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms