Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Mir7071-201ENSMUST00000184847 69 ntBASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-7A0A075B6B0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm10138-203ENSMUST00000206952 366 ntBASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-7A0A075B6B0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm10698-201ENSMUST00000182663 604 ntBASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm29791-202ENSMUST00000207888 369 ntBASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-7A0A075B6B0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.09□□□□□ -0.31
Trav6d-7A0A075B6B0 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms