Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav18A0A075B656 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Gm10517-202ENSMUST00000192970 758 ntBASIC13.9□□□□□ -0.18
Trav18A0A075B656 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.9□□□□□ -0.18
Trav18A0A075B656 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav18A0A075B656 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.9□□□□□ -0.18
Trav18A0A075B656 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav18A0A075B656 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav18A0A075B656 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.88□□□□□ -0.19
Trav18A0A075B656 Gm12441-201ENSMUST00000121806 588 ntBASIC13.88□□□□□ -0.19
Trav18A0A075B656 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.88□□□□□ -0.19
Trav18A0A075B656 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav18A0A075B656 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Gm18666-201ENSMUST00000190039 958 ntBASIC13.87□□□□□ -0.19
Trav18A0A075B656 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.87□□□□□ -0.19
Trav18A0A075B656 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav18A0A075B656 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms