Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav12-3A0A075B648 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Prob1-201ENSMUST00000097619 3021 ntBASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav12-3A0A075B648 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12-3A0A075B648 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12-3A0A075B648 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav12-3A0A075B648 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms