Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Gm10231-201ENSMUST00000181584 441 ntBASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Gm10175-202ENSMUST00000208752 441 ntBASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Gm7213-201ENSMUST00000215977 950 ntBASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav12n-2A0A075B626 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Gm13836-201ENSMUST00000121159 501 ntBASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav12n-2A0A075B626 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav12n-2A0A075B626 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Mir1668-201ENSMUST00000184114 107 ntBASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12n-2A0A075B626 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12n-2A0A075B626 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav12n-2A0A075B626 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms