Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav13d-1A0A075B606 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav13d-1A0A075B606 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13d-1A0A075B606 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Gm2274-201ENSMUST00000184539 609 ntBASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13d-1A0A075B606 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Gm24841-201ENSMUST00000158676 357 ntBASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13d-1A0A075B606 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms