Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm25274-201ENSMUST00000104296 135 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Snord71-201ENSMUST00000104361 85 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Mir654-201ENSMUST00000104787 84 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm25424-201ENSMUST00000157612 58 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm24724-201ENSMUST00000158230 107 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm25901-201ENSMUST00000158494 130 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm26287-201ENSMUST00000158887 81 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Mir3109-201ENSMUST00000175301 88 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm27365-201ENSMUST00000184041 177 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm18213-201ENSMUST00000207850 178 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 Gm23345-201ENSMUST00000083817 150 ntBASIC0.7□□□□□ -2.3
Upk3aQ9JKX8 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm25538-201ENSMUST00000101943 107 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm12797-201ENSMUST00000118645 273 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm22163-201ENSMUST00000158408 135 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm44373-201ENSMUST00000196112 169 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm44326-201ENSMUST00000198226 101 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm44055-201ENSMUST00000204376 247 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Gm45471-201ENSMUST00000211270 281 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Mir33-201ENSMUST00000083531 69 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Mir324-201ENSMUST00000083600 89 ntBASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Upk3aQ9JKX8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Mir669i-201ENSMUST00000117007 127 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Gm24392-201ENSMUST00000158136 103 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Gm24634-201ENSMUST00000158672 107 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Gm25838-201ENSMUST00000158920 120 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Gm24667-201ENSMUST00000158938 103 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Gm29490-201ENSMUST00000190923 342 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 Gm44563-201ENSMUST00000207958 178 ntBASIC0.68□□□□□ -2.3
Upk3aQ9JKX8 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm24423-201ENSMUST00000101982 106 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm25170-201ENSMUST00000104191 129 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm25111-201ENSMUST00000116686 147 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm25544-201ENSMUST00000122676 120 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm23584-201ENSMUST00000157655 129 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm26482-201ENSMUST00000158015 62 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm22200-201ENSMUST00000158614 67 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm25235-201ENSMUST00000179933 107 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Mir6350-201ENSMUST00000183639 105 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm28256-201ENSMUST00000188953 139 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm28559-201ENSMUST00000190532 139 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Mir468-201ENSMUST00000197332 78 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm42988-201ENSMUST00000198116 225 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Gm44977-201ENSMUST00000205283 420 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
Upk3aQ9JKX8 Mir695-201ENSMUST00000102261 109 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Gm14671-201ENSMUST00000121790 262 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Gm24345-201ENSMUST00000158706 124 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Gm42506-201ENSMUST00000202009 150 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Gm36189-201ENSMUST00000204113 523 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Gm22809-201ENSMUST00000082743 156 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Mir362-201ENSMUST00000093592 65 ntBASIC0.66□□□□□ -2.3
Upk3aQ9JKX8 Mir875-201ENSMUST00000104698 78 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm23219-201ENSMUST00000158123 87 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm23579-201ENSMUST00000158528 103 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm25643-201ENSMUST00000158874 103 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm22565-201ENSMUST00000175540 69 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm26073-201ENSMUST00000179906 127 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm22283-201ENSMUST00000082556 161 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Mir448-201ENSMUST00000083516 112 ntBASIC0.65□□□□□ -2.31
Upk3aQ9JKX8 Gm24006-201ENSMUST00000158462 132 ntBASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Mir1961-201ENSMUST00000158643 112 ntBASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Gm24880-201ENSMUST00000158776 85 ntBASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Gm44976-201ENSMUST00000205543 261 ntBASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Gm44948-201ENSMUST00000209050 149 ntBASIC0.64□□□□□ -2.31
Upk3aQ9JKX8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Gm11322-201ENSMUST00000118095 435 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Gm24747-201ENSMUST00000157835 87 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Gm27668-201ENSMUST00000184188 120 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Gm25142-201ENSMUST00000082698 107 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Snora20-201ENSMUST00000082703 128 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Gm23451-201ENSMUST00000083328 122 ntBASIC0.63□□□□□ -2.31
Upk3aQ9JKX8 Snord89-201ENSMUST00000104516 110 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm13797-201ENSMUST00000121792 120 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm23655-201ENSMUST00000122627 105 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm24015-201ENSMUST00000157725 232 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm23581-201ENSMUST00000158531 63 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Mir669k-201ENSMUST00000177742 127 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm25673-201ENSMUST00000179957 127 ntBASIC0.62□□□□□ -2.31
Upk3aQ9JKX8 Gm45544-201ENSMUST00000211130 88 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 753.7 ms