Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm23130-201ENSMUST00000104252 74 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Mir1197-201ENSMUST00000117037 120 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm25643-201ENSMUST00000158874 103 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm22242-201ENSMUST00000175224 118 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm45508-201ENSMUST00000209298 299 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm22809-201ENSMUST00000082743 156 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm24204-201ENSMUST00000082950 107 ntBASIC0.55□□□□□ -2.32
Lmx1aQ9JKU8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm15213-201ENSMUST00000122098 216 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm24401-201ENSMUST00000157868 91 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm22200-201ENSMUST00000158614 67 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm23180-201ENSMUST00000158686 125 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm24345-201ENSMUST00000158706 124 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm25838-201ENSMUST00000158920 120 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm22118-201ENSMUST00000175593 171 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm27980-201ENSMUST00000184094 169 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm28669-201ENSMUST00000188400 100 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Mir7227-201ENSMUST00000200408 59 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm44976-201ENSMUST00000205543 261 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Gm44959-201ENSMUST00000209127 231 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.54□□□□□ -2.32
Lmx1aQ9JKU8 Mir695-201ENSMUST00000102261 109 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm13801-201ENSMUST00000120750 160 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm25783-201ENSMUST00000122525 190 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm22097-201ENSMUST00000157929 278 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm28256-201ENSMUST00000188953 139 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm28559-201ENSMUST00000190532 139 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Mir468-201ENSMUST00000197332 78 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm42988-201ENSMUST00000198116 225 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm45005-201ENSMUST00000206640 157 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.53□□□□□ -2.32
Lmx1aQ9JKU8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Mir669f-201ENSMUST00000103850 121 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Gm12924-201ENSMUST00000121747 318 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Gm24909-201ENSMUST00000157290 280 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Mir5624-201ENSMUST00000176635 61 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Gm29140-201ENSMUST00000190187 476 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Gm22421-201ENSMUST00000083058 107 ntBASIC0.52□□□□□ -2.33
Lmx1aQ9JKU8 Gm25538-201ENSMUST00000101943 107 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm25497-201ENSMUST00000104425 132 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm23584-201ENSMUST00000157655 129 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm24000-201ENSMUST00000158063 89 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm26073-201ENSMUST00000179906 127 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm23571-201ENSMUST00000180073 127 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm28016-201ENSMUST00000184594 196 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm44057-201ENSMUST00000204547 96 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm22283-201ENSMUST00000082556 161 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Gm24316-201ENSMUST00000083041 107 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 Mir362-201ENSMUST00000093592 65 ntBASIC0.51□□□□□ -2.33
Lmx1aQ9JKU8 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm24476-201ENSMUST00000157437 131 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm26415-201ENSMUST00000157673 292 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm22553-201ENSMUST00000157797 295 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm25558-201ENSMUST00000158083 106 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm22450-201ENSMUST00000179641 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm25473-201ENSMUST00000180191 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm42594-201ENSMUST00000199511 246 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm45313-201ENSMUST00000210584 178 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm45544-201ENSMUST00000211130 88 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm24856-201ENSMUST00000082809 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm26497-201ENSMUST00000083146 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm26071-201ENSMUST00000083261 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Gm24521-201ENSMUST00000083958 107 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Mir451a-201ENSMUST00000093557 72 ntBASIC0.5□□□□□ -2.33
Lmx1aQ9JKU8 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm25875-201ENSMUST00000104323 107 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm23531-201ENSMUST00000104567 68 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm25968-201ENSMUST00000157167 100 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Mir1961-201ENSMUST00000158643 112 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm16539-201ENSMUST00000160086 327 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm28008-201ENSMUST00000184021 186 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm28579-201ENSMUST00000186143 369 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm29490-201ENSMUST00000190923 342 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm23406-201ENSMUST00000082537 122 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm24208-201ENSMUST00000082783 135 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm22571-201ENSMUST00000082984 70 ntBASIC0.49□□□□□ -2.33
Lmx1aQ9JKU8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm24747-201ENSMUST00000157835 87 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm24467-201ENSMUST00000157887 126 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm23994-201ENSMUST00000158059 88 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm22836-201ENSMUST00000158441 61 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm24880-201ENSMUST00000158776 85 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm17919-201ENSMUST00000173344 312 ntBASIC0.48□□□□□ -2.33
Lmx1aQ9JKU8 Gm22914-201ENSMUST00000175195 77 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms