Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Snord90-201ENSMUST00000104568 111 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm15069-201ENSMUST00000117792 192 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm15068-201ENSMUST00000119796 192 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm13246-201ENSMUST00000120994 315 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm14709-201ENSMUST00000121225 304 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm22946-201ENSMUST00000158558 82 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Mir669n-201ENSMUST00000158636 54 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm27934-201ENSMUST00000158795 63 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm24668-201ENSMUST00000158935 104 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm24656-201ENSMUST00000177548 132 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm37778-201ENSMUST00000191732 190 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Gm26922-201ENSMUST00000082687 72 ntBASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
Pcdha3Q91Y16 Mir758-201ENSMUST00000103260 81 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm23951-201ENSMUST00000104029 132 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm24141-201ENSMUST00000122776 115 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm29613-201ENSMUST00000185846 313 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm28669-201ENSMUST00000188400 100 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm29544-201ENSMUST00000188860 313 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm28808-201ENSMUST00000190978 313 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm23370-201ENSMUST00000199545 130 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.91□□□□□ -2.1
Pcdha3Q91Y16 Gm24171-201ENSMUST00000104126 131 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm22105-201ENSMUST00000116734 116 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm23109-201ENSMUST00000116867 126 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm13588-201ENSMUST00000120026 135 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Mir1931-201ENSMUST00000158589 119 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Snord87-201ENSMUST00000175437 87 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm44325-201ENSMUST00000196757 77 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm42719-201ENSMUST00000197393 355 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm44976-201ENSMUST00000205543 261 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Snord61-201ENSMUST00000083176 71 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Mir201-201ENSMUST00000083470 66 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Mir34a-201ENSMUST00000083559 102 ntBASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Pcdha3Q91Y16 Gm22750-201ENSMUST00000102076 103 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm24605-201ENSMUST00000104772 96 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm23898-201ENSMUST00000158111 103 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm22163-201ENSMUST00000158408 135 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm23181-201ENSMUST00000158685 110 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm26864-201ENSMUST00000181346 156 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Mir6379-201ENSMUST00000183392 115 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm44464-201ENSMUST00000198010 138 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm22723-201ENSMUST00000083820 129 ntBASIC1.89□□□□□ -2.11
Pcdha3Q91Y16 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm24559-201ENSMUST00000157519 121 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Mir7039-201ENSMUST00000183852 85 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Mir7017-201ENSMUST00000184894 62 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm24461-201ENSMUST00000082735 103 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm24151-201ENSMUST00000082758 141 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm24261-201ENSMUST00000083744 104 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.88□□□□□ -2.11
Pcdha3Q91Y16 Gm26074-201ENSMUST00000104063 129 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm14937-201ENSMUST00000119709 208 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm25558-201ENSMUST00000158083 106 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm23260-201ENSMUST00000158317 172 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm24177-201ENSMUST00000158927 131 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm22775-201ENSMUST00000177630 120 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm23569-201ENSMUST00000180120 120 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Mir7014-201ENSMUST00000183853 63 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm43381-201ENSMUST00000198553 165 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm45654-201ENSMUST00000210980 123 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Gm45492-201ENSMUST00000211611 288 ntBASIC1.87□□□□□ -2.11
Pcdha3Q91Y16 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm23172-201ENSMUST00000157160 124 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm22966-201ENSMUST00000157957 129 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm25836-201ENSMUST00000158918 123 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm23567-201ENSMUST00000178005 107 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Mir7683-201ENSMUST00000183842 61 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm18665-201ENSMUST00000189783 270 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm37579-201ENSMUST00000194291 142 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm8219-201ENSMUST00000218309 242 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm22683-201ENSMUST00000082854 137 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm25697-201ENSMUST00000082902 98 ntBASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Pcdha3Q91Y16 Gm11334-201ENSMUST00000121969 156 ntBASIC1.85□□□□□ -2.11
Pcdha3Q91Y16 Gm22790-201ENSMUST00000157229 129 ntBASIC1.85□□□□□ -2.11
Pcdha3Q91Y16 Gm23277-201ENSMUST00000157914 136 ntBASIC1.85□□□□□ -2.11
Pcdha3Q91Y16 Gm44358-201ENSMUST00000196301 98 ntBASIC1.85□□□□□ -2.11
Pcdha3Q91Y16 Gm25588-201ENSMUST00000082501 140 ntBASIC1.85□□□□□ -2.11
Pcdha3Q91Y16 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Pcdha3Q91Y16 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Gm23656-201ENSMUST00000122626 112 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 U6.1-201ENSMUST00000157443 101 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Gm24717-201ENSMUST00000157522 124 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Mir7026-201ENSMUST00000184384 67 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Mir6352-201ENSMUST00000184495 116 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.84□□□□□ -2.11
Pcdha3Q91Y16 Gm24165-201ENSMUST00000082718 128 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 207.9 ms