Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.23□□□□□ -2.05
Ushbp1Q8R370 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Snord100-201ENSMUST00000116836 74 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm25828-201ENSMUST00000157087 95 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm23469-201ENSMUST00000157131 104 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm22279-201ENSMUST00000157200 93 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm26345-201ENSMUST00000157534 120 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm25884-201ENSMUST00000157782 62 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm22349-201ENSMUST00000157864 107 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm24638-201ENSMUST00000179807 132 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Mir8119-201ENSMUST00000183371 129 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Gm10172-201ENSMUST00000085929 558 ntBASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Ushbp1Q8R370 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Mir301b-201ENSMUST00000102333 97 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm23080-201ENSMUST00000157846 103 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm25658-201ENSMUST00000158472 128 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm27443-201ENSMUST00000184660 98 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm37545-201ENSMUST00000186512 148 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm26922-201ENSMUST00000082687 72 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm24038-201ENSMUST00000082872 159 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Gm22738-201ENSMUST00000083440 147 ntBASIC2.21□□□□□ -2.06
Ushbp1Q8R370 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Ushbp1Q8R370 Gm23651-201ENSMUST00000116755 120 ntBASIC2.2□□□□□ -2.06
Ushbp1Q8R370 Gm22946-201ENSMUST00000158558 82 ntBASIC2.2□□□□□ -2.06
Ushbp1Q8R370 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.2□□□□□ -2.06
Ushbp1Q8R370 Gm23370-201ENSMUST00000199545 130 ntBASIC2.2□□□□□ -2.06
Ushbp1Q8R370 Gm10351-201ENSMUST00000087694 125 ntBASIC2.2□□□□□ -2.06
Ushbp1Q8R370 Gm22494-201ENSMUST00000104495 128 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Gm22105-201ENSMUST00000116734 116 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Gm16328-201ENSMUST00000126985 196 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Gm24668-201ENSMUST00000158935 104 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Gm22306-201ENSMUST00000082692 107 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Mir30d-201ENSMUST00000083503 82 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Ushbp1Q8R370 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.19□□□□□ -2.06
Ushbp1Q8R370 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm24232-201ENSMUST00000104314 132 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm24605-201ENSMUST00000104772 96 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm14567-201ENSMUST00000117155 174 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm14937-201ENSMUST00000119709 208 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm23656-201ENSMUST00000122626 112 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm27672-201ENSMUST00000183751 204 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Mir6901-201ENSMUST00000185062 62 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 Gm24151-201ENSMUST00000082758 141 ntBASIC2.18□□□□□ -2.06
Ushbp1Q8R370 BC022960-201ENSMUST00000119987 1815 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm15069-201ENSMUST00000117792 192 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm15068-201ENSMUST00000119796 192 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm11334-201ENSMUST00000121969 156 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm25980-201ENSMUST00000157176 218 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm22163-201ENSMUST00000158408 135 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Snord87-201ENSMUST00000175437 87 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm29613-201ENSMUST00000185846 313 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm29544-201ENSMUST00000188860 313 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm28808-201ENSMUST00000190978 313 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Mir3969-201ENSMUST00000197106 92 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm19855-201ENSMUST00000210145 249 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm25357-201ENSMUST00000082745 72 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm25627-201ENSMUST00000084003 153 ntBASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ushbp1Q8R370 Gm13246-201ENSMUST00000120994 315 ntBASIC2.16□□□□□ -2.06
Ushbp1Q8R370 Gm5900-201ENSMUST00000179862 375 ntBASIC2.16□□□□□ -2.06
Ushbp1Q8R370 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.16□□□□□ -2.06
Ushbp1Q8R370 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.16□□□□□ -2.06
Ushbp1Q8R370 Gm8219-201ENSMUST00000218309 242 ntBASIC2.16□□□□□ -2.06
Ushbp1Q8R370 Gm22683-201ENSMUST00000082854 137 ntBASIC2.16□□□□□ -2.06
Ushbp1Q8R370 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Ushbp1Q8R370 Snord90-201ENSMUST00000104568 111 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Mir3096-201ENSMUST00000116685 71 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Gm24478-201ENSMUST00000157439 158 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Gm23277-201ENSMUST00000157914 136 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Gm23260-201ENSMUST00000158317 172 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Gm22775-201ENSMUST00000177630 120 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Gm23569-201ENSMUST00000180120 120 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.15□□□□□ -2.07
Ushbp1Q8R370 Gm26339-201ENSMUST00000102368 99 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Gm24141-201ENSMUST00000122776 115 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Gm22966-201ENSMUST00000157957 129 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Gm25558-201ENSMUST00000158083 106 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Gm23181-201ENSMUST00000158685 110 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Gm27934-201ENSMUST00000158795 63 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Mir7683-201ENSMUST00000183842 61 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Snora3-201ENSMUST00000083082 132 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Mir34a-201ENSMUST00000083559 102 ntBASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ushbp1Q8R370 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.13□□□□□ -2.07
Ushbp1Q8R370 Gm27511-201ENSMUST00000183502 127 ntBASIC2.13□□□□□ -2.07
Ushbp1Q8R370 Mir6352-201ENSMUST00000184495 116 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms