Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm27722-201ENSMUST00000183908 76 ntBASIC2.1□□□□□ -2.07
Vps53Q8CCB4 Gm45754-201ENSMUST00000212380 279 ntBASIC2.1□□□□□ -2.07
Vps53Q8CCB4 Gm25357-201ENSMUST00000082745 72 ntBASIC2.1□□□□□ -2.07
Vps53Q8CCB4 Gm23722-201ENSMUST00000083002 130 ntBASIC2.1□□□□□ -2.07
Vps53Q8CCB4 Gm10813-201ENSMUST00000099936 90 ntBASIC2.1□□□□□ -2.07
Vps53Q8CCB4 Gm23772-201ENSMUST00000104433 102 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Snord100-201ENSMUST00000116836 74 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Gm24851-201ENSMUST00000158028 103 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Mir1931-201ENSMUST00000158589 119 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Gm24668-201ENSMUST00000158935 104 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Mir6379-201ENSMUST00000183392 115 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Gm9251-201ENSMUST00000197202 628 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Gm19855-201ENSMUST00000210145 249 ntBASIC2.09□□□□□ -2.07
Vps53Q8CCB4 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm26339-201ENSMUST00000102368 99 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm24656-201ENSMUST00000177548 132 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm26337-201ENSMUST00000178000 79 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm27672-201ENSMUST00000183751 204 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Mir7021-201ENSMUST00000197026 63 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm25136-201ENSMUST00000083253 115 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm22297-201ENSMUST00000083312 106 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm25627-201ENSMUST00000084003 153 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Vps53Q8CCB4 Gm25832-201ENSMUST00000104140 130 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 Gm13246-201ENSMUST00000120994 315 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 Gm25882-201ENSMUST00000157784 85 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 Gm24412-201ENSMUST00000083426 109 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.07□□□□□ -2.08
Vps53Q8CCB4 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm24171-201ENSMUST00000104126 131 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm24232-201ENSMUST00000104314 132 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm23651-201ENSMUST00000116755 120 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm24783-201ENSMUST00000157639 100 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm25884-201ENSMUST00000157782 62 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm23922-201ENSMUST00000178792 79 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm24657-201ENSMUST00000180085 79 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm22996-201ENSMUST00000180236 79 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Gm42719-201ENSMUST00000197393 355 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Snord43-201ENSMUST00000199549 108 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Mir107-201ENSMUST00000083660 87 ntBASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Vps53Q8CCB4 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Mir669b-201ENSMUST00000102172 97 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm15069-201ENSMUST00000117792 192 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm15068-201ENSMUST00000119796 192 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm27934-201ENSMUST00000158795 63 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm23966-201ENSMUST00000179823 107 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Mir3969-201ENSMUST00000197106 92 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm23370-201ENSMUST00000199545 130 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm26454-201ENSMUST00000082682 107 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm22306-201ENSMUST00000082692 107 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Gm22738-201ENSMUST00000083440 147 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Mir34a-201ENSMUST00000083559 102 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 Snora33-201ENSMUST00000093556 129 ntBASIC2.05□□□□□ -2.08
Vps53Q8CCB4 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Mir873a-201ENSMUST00000104863 77 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm14567-201ENSMUST00000117155 174 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm26049-201ENSMUST00000157313 108 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm23898-201ENSMUST00000158111 103 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm24222-201ENSMUST00000158834 93 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm23714-201ENSMUST00000179259 105 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm29603-201ENSMUST00000186792 334 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm28669-201ENSMUST00000188400 100 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm37778-201ENSMUST00000191732 190 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Mir151-201ENSMUST00000083678 68 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Gm23947-201ENSMUST00000093636 107 ntBASIC2.04□□□□□ -2.08
Vps53Q8CCB4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Gm14937-201ENSMUST00000119709 208 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Gm25980-201ENSMUST00000157176 218 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Gm26004-201ENSMUST00000158804 116 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Gm25994-201ENSMUST00000175392 101 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Gm44325-201ENSMUST00000196757 77 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Gm24261-201ENSMUST00000083744 104 ntBASIC2.03□□□□□ -2.08
Vps53Q8CCB4 Snord90-201ENSMUST00000104568 111 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm22381-201ENSMUST00000158186 107 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm25920-201ENSMUST00000158307 99 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm20477-201ENSMUST00000174028 280 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Mir3086-201ENSMUST00000175072 87 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm26864-201ENSMUST00000181346 156 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm37545-201ENSMUST00000186512 148 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm44464-201ENSMUST00000198010 138 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm43381-201ENSMUST00000198553 165 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 Gm44976-201ENSMUST00000205543 261 ntBASIC2.02□□□□□ -2.09
Vps53Q8CCB4 AC069074.1-201ENSMUST00000220048 381 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms