Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44491-201ENSMUST00000196794 96 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Gm35736-201ENSMUST00000203681 313 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Gm25628-201ENSMUST00000084002 105 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.2□□□□□ -1.9
Trim47Q8C0E3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trim47Q8C0E3 Rnu7-201ENSMUST00000158458 62 ntBASIC3.19□□□□□ -1.9
Trim47Q8C0E3 Mir1931-201ENSMUST00000158589 119 ntBASIC3.19□□□□□ -1.9
Trim47Q8C0E3 Gm25488-201ENSMUST00000158728 118 ntBASIC3.19□□□□□ -1.9
Trim47Q8C0E3 Mir6376-201ENSMUST00000185149 131 ntBASIC3.19□□□□□ -1.9
Trim47Q8C0E3 Trbv25-201ENSMUST00000194700 273 ntBASIC3.19□□□□□ -1.9
Trim47Q8C0E3 Gm3081-201ENSMUST00000193413 3025 ntBASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Gm12309-201ENSMUST00000119889 182 ntBASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Gm23090-201ENSMUST00000177331 78 ntBASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Gm28647-201ENSMUST00000188416 197 ntBASIC3.18□□□□□ -1.9
Trim47Q8C0E3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Snord7-201ENSMUST00000083781 97 ntBASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim47Q8C0E3 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trim47Q8C0E3 n-R5s39-201ENSMUST00000122613 108 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Gm25280-201ENSMUST00000157269 101 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Gm22605-201ENSMUST00000158289 108 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Gm27379-201ENSMUST00000183730 123 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Gm3702-201ENSMUST00000211754 346 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Mir411-201ENSMUST00000083543 82 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Snord80-201ENSMUST00000083801 81 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Snora33-201ENSMUST00000093556 129 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Trim47Q8C0E3 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trim47Q8C0E3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Gm13433-201ENSMUST00000121701 240 ntBASIC3.16□□□□□ -1.9
Trim47Q8C0E3 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Snord93-201ENSMUST00000175580 71 ntBASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Gm27987-201ENSMUST00000184023 93 ntBASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Gm27700-201ENSMUST00000185003 81 ntBASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trim47Q8C0E3 Mir802-201ENSMUST00000103258 97 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm22279-201ENSMUST00000157200 93 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm22522-201ENSMUST00000158271 151 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm22503-201ENSMUST00000158983 115 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm5224-201ENSMUST00000183060 350 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm43521-201ENSMUST00000197838 255 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm43107-201ENSMUST00000198729 255 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm45544-201ENSMUST00000211130 88 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 AC069074.1-201ENSMUST00000220048 381 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 mt-Tl2-201ENSMUST00000082417 71 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Gm25705-201ENSMUST00000083119 104 ntBASIC3.15□□□□□ -1.91
Trim47Q8C0E3 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm25847-201ENSMUST00000116793 96 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm24443-201ENSMUST00000157242 132 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm25371-201ENSMUST00000158162 101 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Snora26-201ENSMUST00000175614 121 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm45268-201ENSMUST00000210046 370 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm25644-201ENSMUST00000083209 107 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.14□□□□□ -1.91
Trim47Q8C0E3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm23203-201ENSMUST00000104374 107 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm26150-201ENSMUST00000157426 151 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm25884-201ENSMUST00000157782 62 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm25329-201ENSMUST00000158041 126 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm24879-201ENSMUST00000158386 143 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm25229-201ENSMUST00000178587 79 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Mir6353-201ENSMUST00000183596 113 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Mir21c-201ENSMUST00000184910 78 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm27505-201ENSMUST00000185071 110 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm8031-201ENSMUST00000213430 626 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm22458-201ENSMUST00000082576 107 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm23738-201ENSMUST00000082828 171 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Gm24805-201ENSMUST00000082931 104 ntBASIC3.13□□□□□ -1.91
Trim47Q8C0E3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Gm22535-201ENSMUST00000158174 119 ntBASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Gm25528-201ENSMUST00000180264 132 ntBASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trim47Q8C0E3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trim47Q8C0E3 Gm25500-201ENSMUST00000104426 123 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 n-R5s73-201ENSMUST00000122508 107 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 DQ267100-201ENSMUST00000122600 72 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm25270-201ENSMUST00000122606 138 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm22999-201ENSMUST00000157082 88 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm23065-201ENSMUST00000158236 130 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm27639-201ENSMUST00000184937 85 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm44526-201ENSMUST00000204664 121 ntBASIC3.11□□□□□ -1.91
Trim47Q8C0E3 Gm25199-201ENSMUST00000083095 104 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 782.2 ms