Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Mir542-201ENSMUST00000102186 85 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Gm23253-201ENSMUST00000157441 104 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Gm25678-201ENSMUST00000174984 73 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Gm26864-201ENSMUST00000181346 156 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Mir6406-201ENSMUST00000183592 120 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Gm44932-201ENSMUST00000206799 121 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Shkbp1Q6P7W2 Gm24171-201ENSMUST00000104126 131 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Gm16355-201ENSMUST00000128606 231 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Gm22803-201ENSMUST00000158049 283 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Mir7026-201ENSMUST00000184384 67 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Gm45791-201ENSMUST00000212908 352 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Gm16976-205ENSMUST00000227324 226 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Gm26168-201ENSMUST00000083787 112 ntBASIC2.29□□□□□ -2.04
Shkbp1Q6P7W2 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm12013-201ENSMUST00000121971 155 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm24632-201ENSMUST00000122770 323 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm22510-201ENSMUST00000179304 79 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm26336-201ENSMUST00000179449 79 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm26390-201ENSMUST00000179628 79 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm24536-201ENSMUST00000083144 107 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.28□□□□□ -2.04
Shkbp1Q6P7W2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm25022-201ENSMUST00000102205 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm14946-201ENSMUST00000119859 296 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm15281-201ENSMUST00000125181 351 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm24769-201ENSMUST00000158506 129 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm28669-201ENSMUST00000188400 100 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm37330-201ENSMUST00000192606 153 ntBASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.27□□□□□ -2.05
Shkbp1Q6P7W2 Gm23011-201ENSMUST00000104148 132 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm6444-201ENSMUST00000119611 458 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm26105-201ENSMUST00000157253 190 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm24237-201ENSMUST00000157790 132 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm25364-201ENSMUST00000158851 107 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm22093-201ENSMUST00000158980 111 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm43512-201ENSMUST00000198495 176 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Gm23244-201ENSMUST00000083375 92 ntBASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
Shkbp1Q6P7W2 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm25091-201ENSMUST00000103997 71 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm25526-201ENSMUST00000104332 132 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm14709-201ENSMUST00000121225 304 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm25544-201ENSMUST00000122676 120 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm22079-201ENSMUST00000157592 106 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Rnu7-201ENSMUST00000158458 62 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm25711-201ENSMUST00000158633 128 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm22683-201ENSMUST00000082854 137 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.25□□□□□ -2.05
Shkbp1Q6P7W2 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Gm26280-201ENSMUST00000157096 101 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Gm22279-201ENSMUST00000157200 93 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Mir1931-201ENSMUST00000158589 119 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Gm23090-201ENSMUST00000177331 78 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Gm24313-201ENSMUST00000082561 133 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Snord118-201ENSMUST00000082965 135 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 BC022960-201ENSMUST00000119987 1815 ntBASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Shkbp1Q6P7W2 Gm26420-201ENSMUST00000104273 103 ntBASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Gm22163-201ENSMUST00000158408 135 ntBASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Gm24177-201ENSMUST00000158927 131 ntBASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Gm27991-201ENSMUST00000184804 137 ntBASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Snord104-201ENSMUST00000083192 70 ntBASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Shkbp1Q6P7W2 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Mir547-201ENSMUST00000102051 78 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm22451-201ENSMUST00000122803 151 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm23983-201ENSMUST00000157142 114 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm22731-201ENSMUST00000158086 94 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm24900-201ENSMUST00000158128 134 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm25771-201ENSMUST00000158565 144 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Gm7258-201ENSMUST00000179317 300 ntBASIC2.22□□□□□ -2.05
Shkbp1Q6P7W2 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 316.7 ms