Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm22744-201ENSMUST00000083444 65 ntBASIC1.22□□□□□ -2.21
Sdc3Q64519 Mir211-201ENSMUST00000083651 106 ntBASIC1.22□□□□□ -2.21
Sdc3Q64519 Gm24522-201ENSMUST00000083964 108 ntBASIC1.22□□□□□ -2.21
Sdc3Q64519 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.21□□□□□ -2.22
Sdc3Q64519 Gm25538-201ENSMUST00000101943 107 ntBASIC1.21□□□□□ -2.22
Sdc3Q64519 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Sdc3Q64519 Gm24379-201ENSMUST00000122695 86 ntBASIC1.21□□□□□ -2.22
Sdc3Q64519 Mir6350-201ENSMUST00000183639 105 ntBASIC1.21□□□□□ -2.22
Sdc3Q64519 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.21□□□□□ -2.22
Sdc3Q64519 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.21□□□□□ -2.22
Sdc3Q64519 Mir343-201ENSMUST00000102360 75 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm24865-201ENSMUST00000103246 96 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm24867-201ENSMUST00000104161 107 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm23106-201ENSMUST00000157554 101 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm23996-201ENSMUST00000158062 131 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm22888-201ENSMUST00000158640 77 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm27894-201ENSMUST00000184177 92 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm28344-201ENSMUST00000185704 279 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm44326-201ENSMUST00000198226 101 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Mir384-201ENSMUST00000083565 88 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Gm24762-201ENSMUST00000083689 104 ntBASIC1.2□□□□□ -2.22
Sdc3Q64519 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm26074-201ENSMUST00000104063 129 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm24588-201ENSMUST00000116696 83 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm23083-201ENSMUST00000157851 116 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Mir3968-201ENSMUST00000175355 100 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm22802-201ENSMUST00000175621 89 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm23141-201ENSMUST00000178682 94 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Mir6240-201ENSMUST00000184281 117 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm6003-201ENSMUST00000187903 463 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm44057-201ENSMUST00000204547 96 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm22884-201ENSMUST00000083127 140 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm24523-201ENSMUST00000083965 132 ntBASIC1.19□□□□□ -2.22
Sdc3Q64519 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Gm11856-201ENSMUST00000118712 276 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Gm25390-201ENSMUST00000157341 103 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Gm22129-201ENSMUST00000179034 107 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Gm45508-201ENSMUST00000209298 299 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Gm25409-201ENSMUST00000083764 131 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.18□□□□□ -2.22
Sdc3Q64519 Gm22780-201ENSMUST00000104084 132 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm22051-201ENSMUST00000117002 127 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm23584-201ENSMUST00000157655 129 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm25654-201ENSMUST00000158467 88 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm22074-201ENSMUST00000158595 113 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm26468-201ENSMUST00000158644 106 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm22944-201ENSMUST00000158662 133 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm28669-201ENSMUST00000188400 100 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm44921-201ENSMUST00000205290 301 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Gm26224-201ENSMUST00000082506 80 ntBASIC1.17□□□□□ -2.22
Sdc3Q64519 Mir1904-201ENSMUST00000122702 80 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm26213-201ENSMUST00000158582 110 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm23636-201ENSMUST00000175070 95 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm24154-201ENSMUST00000175261 130 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm26426-201ENSMUST00000177866 123 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm26060-201ENSMUST00000180094 123 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Mir7059-201ENSMUST00000184825 59 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm24624-201ENSMUST00000082617 164 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm25855-201ENSMUST00000082787 72 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm25650-201ENSMUST00000083784 162 ntBASIC1.16□□□□□ -2.22
Sdc3Q64519 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Sdc3Q64519 Gm14838-201ENSMUST00000118913 248 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm23329-201ENSMUST00000157415 108 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm22233-201ENSMUST00000157464 114 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm25223-201ENSMUST00000158200 110 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm23545-201ENSMUST00000158205 104 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm25868-201ENSMUST00000158253 114 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm23258-201ENSMUST00000158319 106 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.15□□□□□ -2.23
Sdc3Q64519 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.15□□□□□ -2.23
Sdc3Q64519 Gm26293-201ENSMUST00000104170 84 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm22149-201ENSMUST00000104442 136 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm25558-201ENSMUST00000158083 106 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm24634-201ENSMUST00000158672 107 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm20391-201ENSMUST00000174722 106 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Mir7052-201ENSMUST00000184821 65 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm25895-201ENSMUST00000083714 100 ntBASIC1.14□□□□□ -2.23
Sdc3Q64519 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Sdc3Q64519 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Sdc3Q64519 Gm23655-201ENSMUST00000122627 105 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm26279-201ENSMUST00000157095 102 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm23901-201ENSMUST00000157570 107 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm26415-201ENSMUST00000157673 292 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm22485-201ENSMUST00000157990 109 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm24729-201ENSMUST00000158225 137 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm23760-201ENSMUST00000158350 116 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm26029-201ENSMUST00000158659 132 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm24345-201ENSMUST00000158706 124 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Mir669k-201ENSMUST00000177742 127 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm25673-201ENSMUST00000179957 127 ntBASIC1.13□□□□□ -2.23
Sdc3Q64519 Gm43199-201ENSMUST00000200019 307 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms