Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm37579-201ENSMUST00000194291 142 ntBASIC2.58□□□□□ -2
Trim28Q62318 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.58□□□□□ -2
Trim28Q62318 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.58□□□□□ -2
Trim28Q62318 Gm44024-201ENSMUST00000203008 476 ntBASIC2.58□□□□□ -2
Trim28Q62318 AC126672.1-201ENSMUST00000217096 396 ntBASIC2.58□□□□□ -2
Trim28Q62318 Gm22683-201ENSMUST00000082854 137 ntBASIC2.58□□□□□ -2
Trim28Q62318 Gm23244-201ENSMUST00000083375 92 ntBASIC2.58□□□□□ -2
Trim28Q62318 Gm22738-201ENSMUST00000083440 147 ntBASIC2.58□□□□□ -2
Trim28Q62318 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim28Q62318 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.57□□□□□ -2
Trim28Q62318 Gm26051-201ENSMUST00000104642 93 ntBASIC2.57□□□□□ -2
Trim28Q62318 Gm25753-201ENSMUST00000116792 121 ntBASIC2.57□□□□□ -2
Trim28Q62318 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.57□□□□□ -2
Trim28Q62318 Gm24837-201ENSMUST00000158683 81 ntBASIC2.57□□□□□ -2
Trim28Q62318 Gm44358-201ENSMUST00000196301 98 ntBASIC2.57□□□□□ -2
Trim28Q62318 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.57□□□□□ -2
Trim28Q62318 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.57□□□□□ -2
Trim28Q62318 Gm14502-201ENSMUST00000118154 113 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm24246-201ENSMUST00000157315 132 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm23043-201ENSMUST00000157890 109 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm25488-201ENSMUST00000158728 118 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm27979-201ENSMUST00000185126 56 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm38364-201ENSMUST00000191814 179 ntBASIC2.56□□□□□ -2
Trim28Q62318 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.56□□□□□ -2
Trim28Q62318 Snord104-201ENSMUST00000083192 70 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm23040-201ENSMUST00000083869 163 ntBASIC2.56□□□□□ -2
Trim28Q62318 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim28Q62318 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.56□□□□□ -2
Trim28Q62318 AC160984.1-201ENSMUST00000225855 3154 ntBASIC2.55□□□□□ -2
Trim28Q62318 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Trim28Q62318 Gm25045-201ENSMUST00000122670 99 ntBASIC2.55□□□□□ -2
Trim28Q62318 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm22510-201ENSMUST00000179304 79 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm26336-201ENSMUST00000179449 79 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm26390-201ENSMUST00000179628 79 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trim28Q62318 Gm29535-201ENSMUST00000185723 109 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm28143-201ENSMUST00000191082 109 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.55□□□□□ -2
Trim28Q62318 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm25124-201ENSMUST00000083345 164 ntBASIC2.55□□□□□ -2
Trim28Q62318 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.55□□□□□ -2
Trim28Q62318 Gm23665-201ENSMUST00000158054 62 ntBASIC2.54□□□□□ -2
Trim28Q62318 Snord11-201ENSMUST00000158468 84 ntBASIC2.54□□□□□ -2
Trim28Q62318 Gm22708-201ENSMUST00000158987 103 ntBASIC2.54□□□□□ -2
Trim28Q62318 Mir7679-201ENSMUST00000183379 63 ntBASIC2.54□□□□□ -2
Trim28Q62318 Gm43206-201ENSMUST00000197990 114 ntBASIC2.54□□□□□ -2
Trim28Q62318 Gm44921-201ENSMUST00000205290 301 ntBASIC2.54□□□□□ -2
Trim28Q62318 Gm16976-205ENSMUST00000227324 226 ntBASIC2.54□□□□□ -2
Trim28Q62318 BC022960-201ENSMUST00000119987 1815 ntBASIC2.54□□□□□ -2
Trim28Q62318 AC127302.3-201ENSMUST00000215480 2791 ntBASIC2.53□□□□□ -2
Trim28Q62318 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim28Q62318 Gm14568-201ENSMUST00000119321 294 ntBASIC2.53□□□□□ -2
Trim28Q62318 Gm23194-201ENSMUST00000158813 105 ntBASIC2.53□□□□□ -2
Trim28Q62318 Mir1291-201ENSMUST00000199842 117 ntBASIC2.53□□□□□ -2
Trim28Q62318 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.53□□□□□ -2
Trim28Q62318 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.53□□□□□ -2
Trim28Q62318 Gm25588-201ENSMUST00000082501 140 ntBASIC2.53□□□□□ -2
Trim28Q62318 Snora34-201ENSMUST00000083402 138 ntBASIC2.53□□□□□ -2
Trim28Q62318 Gm26253-201ENSMUST00000122493 103 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm23324-201ENSMUST00000157421 131 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm23253-201ENSMUST00000157441 104 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm24394-201ENSMUST00000158141 123 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm22535-201ENSMUST00000158174 119 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm45522-201ENSMUST00000210784 166 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm45654-201ENSMUST00000210980 123 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm23509-201ENSMUST00000083080 160 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Gm22866-201ENSMUST00000083947 177 ntBASIC2.52□□□□□ -2.01
Trim28Q62318 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trim28Q62318 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm23010-201ENSMUST00000104151 126 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm13588-201ENSMUST00000120026 135 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm24896-201ENSMUST00000122741 135 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm24480-201ENSMUST00000157442 103 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm20613-201ENSMUST00000175828 345 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm8034-201ENSMUST00000178853 132 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Mir7225-201ENSMUST00000184178 54 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm25796-201ENSMUST00000082645 163 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm25851-201ENSMUST00000082794 107 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm22251-201ENSMUST00000083216 107 ntBASIC2.51□□□□□ -2.01
Trim28Q62318 Gm24049-201ENSMUST00000102409 100 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm23011-201ENSMUST00000104148 132 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm26421-201ENSMUST00000104279 132 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Snord100-201ENSMUST00000116836 74 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm14588-201ENSMUST00000119895 172 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm24718-201ENSMUST00000157521 136 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm25367-201ENSMUST00000158846 106 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm20438-201ENSMUST00000174441 329 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Mir7017-201ENSMUST00000184894 62 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Mir8090-201ENSMUST00000185078 136 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.5□□□□□ -2.01
Trim28Q62318 Gm25323-201ENSMUST00000122555 103 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm25544-201ENSMUST00000122676 120 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm16265-201ENSMUST00000134558 108 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm22228-201ENSMUST00000157364 101 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm23859-201ENSMUST00000158383 64 ntBASIC2.49□□□□□ -2.01
Trim28Q62318 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms