Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm25855-201ENSMUST00000082787 72 ntBASIC1.76□□□□□ -2.13
Ift88Q61371 Mir488-201ENSMUST00000093595 109 ntBASIC1.76□□□□□ -2.13
Ift88Q61371 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Ift88Q61371 Gm11334-201ENSMUST00000121969 156 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 U6.1-201ENSMUST00000157443 101 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm22603-201ENSMUST00000157603 96 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm26360-201ENSMUST00000158872 103 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm16546-201ENSMUST00000159442 355 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm22348-201ENSMUST00000178674 79 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm28409-201ENSMUST00000187064 103 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm42623-201ENSMUST00000197225 379 ntBASIC1.75□□□□□ -2.13
Ift88Q61371 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.75□□□□□ -2.13
Ift88Q61371 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Mir669d-201ENSMUST00000104644 121 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Mir1298-201ENSMUST00000116681 98 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm23109-201ENSMUST00000116867 126 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm14567-201ENSMUST00000117155 174 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm15067-201ENSMUST00000119534 156 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm6444-201ENSMUST00000119611 458 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm23996-201ENSMUST00000158062 131 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm25716-201ENSMUST00000158628 104 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm24345-201ENSMUST00000158706 124 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ift88Q61371 Gm27511-201ENSMUST00000183502 127 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Mir6997-201ENSMUST00000184313 71 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm25820-202ENSMUST00000197479 128 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm44320-201ENSMUST00000199276 86 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm45754-201ENSMUST00000212380 279 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm22884-201ENSMUST00000083127 140 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm25409-201ENSMUST00000083764 131 ntBASIC1.74□□□□□ -2.13
Ift88Q61371 Gm25423-201ENSMUST00000157609 107 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 Gm24000-201ENSMUST00000158063 89 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 Gm22264-201ENSMUST00000178200 107 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 Gm37116-201ENSMUST00000195161 147 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 Gm44384-201ENSMUST00000200208 114 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 Gm45544-201ENSMUST00000211130 88 ntBASIC1.73□□□□□ -2.13
Ift88Q61371 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ift88Q61371 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.73□□□□□ -2.13
Ift88Q61371 Mir880-201ENSMUST00000104809 78 ntBASIC1.72□□□□□ -2.13
Ift88Q61371 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.72□□□□□ -2.13
Ift88Q61371 Gm22612-201ENSMUST00000158293 101 ntBASIC1.72□□□□□ -2.13
Ift88Q61371 Gm24229-201ENSMUST00000158830 118 ntBASIC1.72□□□□□ -2.13
Ift88Q61371 Gm26073-201ENSMUST00000179906 127 ntBASIC1.72□□□□□ -2.13
Ift88Q61371 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.72□□□□□ -2.13
Ift88Q61371 Gm22283-201ENSMUST00000082556 161 ntBASIC1.72□□□□□ -2.13
Ift88Q61371 Gm23170-201ENSMUST00000157158 106 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 Gm26213-201ENSMUST00000158582 110 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 Mir8090-201ENSMUST00000185078 136 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 Gm44962-201ENSMUST00000206460 279 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 Gm22738-201ENSMUST00000083440 147 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.71□□□□□ -2.14
Ift88Q61371 Gm23772-201ENSMUST00000104433 102 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Gm15115-201ENSMUST00000121145 264 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Gm22387-201ENSMUST00000158191 131 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Mir669n-201ENSMUST00000158636 54 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Mir5104-201ENSMUST00000175319 94 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Mir6352-201ENSMUST00000184495 116 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Snord14a-201ENSMUST00000082807 87 ntBASIC1.7□□□□□ -2.14
Ift88Q61371 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.7□□□□□ -2.14
Ift88Q61371 Gm11792-201ENSMUST00000120640 168 ntBASIC1.69□□□□□ -2.14
Ift88Q61371 Gm13345-201ENSMUST00000121928 228 ntBASIC1.69□□□□□ -2.14
Ift88Q61371 Gm25882-201ENSMUST00000157784 85 ntBASIC1.69□□□□□ -2.14
Ift88Q61371 Gm20391-201ENSMUST00000174722 106 ntBASIC1.69□□□□□ -2.14
Ift88Q61371 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.69□□□□□ -2.14
Ift88Q61371 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.69□□□□□ -2.14
Ift88Q61371 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.69□□□□□ -2.14
Ift88Q61371 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Gm23080-201ENSMUST00000157846 103 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Gm22699-201ENSMUST00000175376 105 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Mir7039-201ENSMUST00000183852 85 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Mir7675-201ENSMUST00000184262 58 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Gm43749-201ENSMUST00000199345 352 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Gm25038-201ENSMUST00000082928 130 ntBASIC1.68□□□□□ -2.14
Ift88Q61371 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ift88Q61371 Mir544-201ENSMUST00000103813 78 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm13588-201ENSMUST00000120026 135 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm23277-201ENSMUST00000157914 136 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm22967-201ENSMUST00000157956 239 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Mir1966-201ENSMUST00000158807 108 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm24222-201ENSMUST00000158834 93 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm22403-201ENSMUST00000174919 84 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Mir3061-201ENSMUST00000175129 91 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm42988-201ENSMUST00000198116 225 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Gm24523-201ENSMUST00000083965 132 ntBASIC1.67□□□□□ -2.14
Ift88Q61371 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ift88Q61371 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Ift88Q61371 Gm22790-201ENSMUST00000157229 129 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 Gm22082-201ENSMUST00000157587 161 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 Gm22963-201ENSMUST00000157960 91 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 Gm22946-201ENSMUST00000158558 82 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 Gm25771-201ENSMUST00000158565 144 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 Gm23567-201ENSMUST00000178005 107 ntBASIC1.66□□□□□ -2.14
Ift88Q61371 Gm44338-201ENSMUST00000198614 110 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms