Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.84□□□□□ -2.54
Trav6d-4Q5R1I0 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Mir6350-201ENSMUST00000183639 105 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm43884-201ENSMUST00000204251 559 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Mir183-201ENSMUST00000083685 70 ntBASIC-0.85□□□□□ -2.55
Trav6d-4Q5R1I0 Mir767-201ENSMUST00000103256 107 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm23411-201ENSMUST00000157988 62 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm19790-201ENSMUST00000214414 251 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm25204-201ENSMUST00000082843 106 ntBASIC-0.86□□□□□ -2.55
Trav6d-4Q5R1I0 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm26203-201ENSMUST00000082911 114 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.87□□□□□ -2.55
Trav6d-4Q5R1I0 Gm26384-201ENSMUST00000102183 110 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 Gm26173-201ENSMUST00000158416 136 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 Gm37313-201ENSMUST00000191673 290 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.88□□□□□ -2.55
Trav6d-4Q5R1I0 Gm24116-201ENSMUST00000103975 107 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm24440-201ENSMUST00000157236 63 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.89□□□□□ -2.55
Trav6d-4Q5R1I0 Gm24577-201ENSMUST00000158580 63 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28767-201ENSMUST00000188601 114 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
Trav6d-4Q5R1I0 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm27926-201ENSMUST00000157180 66 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm24921-201ENSMUST00000083024 107 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.91□□□□□ -2.56
Trav6d-4Q5R1I0 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Gm9593-201ENSMUST00000166034 469 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 CT009718.4-201ENSMUST00000221881 109 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Gm6369-201ENSMUST00000069626 412 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Gm24030-201ENSMUST00000083931 164 ntBASIC-0.92□□□□□ -2.56
Trav6d-4Q5R1I0 Mir1899-201ENSMUST00000122798 96 ntBASIC-0.93□□□□□ -2.56
Trav6d-4Q5R1I0 Gm22215-201ENSMUST00000157558 96 ntBASIC-0.93□□□□□ -2.56
Trav6d-4Q5R1I0 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.93□□□□□ -2.56
Trav6d-4Q5R1I0 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC-0.93□□□□□ -2.56
Trav6d-4Q5R1I0 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.93□□□□□ -2.56
Trav6d-4Q5R1I0 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 234.6 ms