Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm24476-201ENSMUST00000157437 131 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Gm25882-201ENSMUST00000157784 85 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Gm22553-201ENSMUST00000157797 295 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Gm22387-201ENSMUST00000158191 131 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Gm43406-201ENSMUST00000200356 334 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm25110-201ENSMUST00000116684 121 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm25775-201ENSMUST00000116716 121 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm24795-201ENSMUST00000116737 121 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm25171-201ENSMUST00000116926 121 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm25318-201ENSMUST00000122554 314 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm26194-201ENSMUST00000175036 71 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm25615-201ENSMUST00000177836 94 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm29665-201ENSMUST00000191457 528 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm24527-201ENSMUST00000082920 107 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm25793-201ENSMUST00000083287 107 ntBASIC0.22□□□□□ -2.37
Trav3-3Q5R1C3 Gm22032-201ENSMUST00000116946 116 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm12771-201ENSMUST00000120246 135 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm26479-201ENSMUST00000122620 106 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm27723-201ENSMUST00000157398 63 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm22586-201ENSMUST00000157507 122 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm23763-201ENSMUST00000158345 60 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Mir7009-201ENSMUST00000184519 64 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Mir6540-201ENSMUST00000184886 108 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm29512-201ENSMUST00000185544 315 ntBASIC0.21□□□□□ -2.38
Trav3-3Q5R1C3 Gm15289-201ENSMUST00000117793 244 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Gm22984-201ENSMUST00000122751 122 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Gm25901-201ENSMUST00000158494 130 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Gm23375-201ENSMUST00000175407 83 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Mir7014-201ENSMUST00000183853 63 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Gm36189-201ENSMUST00000204113 523 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.2□□□□□ -2.38
Trav3-3Q5R1C3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Gm24171-201ENSMUST00000104126 131 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Gm23714-201ENSMUST00000179259 105 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Trav3-3Q5R1C3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Mir759-201ENSMUST00000103254 98 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Snord69-201ENSMUST00000104024 80 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Gm24549-201ENSMUST00000158647 139 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Gm23340-201ENSMUST00000158955 123 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Gm22118-201ENSMUST00000175593 171 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Mir6377-201ENSMUST00000183760 114 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Gm37313-201ENSMUST00000191673 290 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Gm45673-201ENSMUST00000210293 358 ntBASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Trav3-3Q5R1C3 Gm24275-201ENSMUST00000116780 146 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Gm15069-201ENSMUST00000117792 192 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Gm15068-201ENSMUST00000119796 192 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Gm13246-201ENSMUST00000120994 315 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Gm13725-201ENSMUST00000122139 207 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Gm25814-201ENSMUST00000082754 107 ntBASIC0.17□□□□□ -2.38
Trav3-3Q5R1C3 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Snord71-201ENSMUST00000104361 85 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm24833-201ENSMUST00000116775 120 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm23838-201ENSMUST00000158067 162 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm24500-201ENSMUST00000158447 124 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm24547-201ENSMUST00000158649 149 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm22466-201ENSMUST00000175278 69 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm25300-201ENSMUST00000175284 84 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm43944-201ENSMUST00000205220 120 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.16□□□□□ -2.38
Trav3-3Q5R1C3 Gm25875-201ENSMUST00000104323 107 ntBASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Gm24737-201ENSMUST00000158861 100 ntBASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Gm22565-201ENSMUST00000175540 69 ntBASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Mir5624-201ENSMUST00000176635 61 ntBASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Mir6365-201ENSMUST00000183990 101 ntBASIC0.15□□□□□ -2.39
Trav3-3Q5R1C3 Gm28579-201ENSMUST00000186143 369 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms