Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Rnf180Q3U827 Gm24634-201ENSMUST00000158672 107 ntBASIC2.4□□□□□ -2.03
Rnf180Q3U827 Mir6350-201ENSMUST00000183639 105 ntBASIC2.4□□□□□ -2.03
Rnf180Q3U827 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.4□□□□□ -2.03
Rnf180Q3U827 Gm37116-201ENSMUST00000195161 147 ntBASIC2.4□□□□□ -2.03
Rnf180Q3U827 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.4□□□□□ -2.03
Rnf180Q3U827 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.4□□□□□ -2.03
Rnf180Q3U827 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.4□□□□□ -2.03
Rnf180Q3U827 Gm25136-201ENSMUST00000083253 115 ntBASIC2.4□□□□□ -2.03
Rnf180Q3U827 Gm22297-201ENSMUST00000083312 106 ntBASIC2.4□□□□□ -2.03
Rnf180Q3U827 Snord71-201ENSMUST00000104361 85 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm25787-201ENSMUST00000104709 92 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm25828-201ENSMUST00000157087 95 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm22727-201ENSMUST00000158090 116 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm23922-201ENSMUST00000178792 79 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm24657-201ENSMUST00000180085 79 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm22996-201ENSMUST00000180236 79 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm44458-201ENSMUST00000196594 143 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm44921-201ENSMUST00000205290 301 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 AC164561.1-201ENSMUST00000220414 115 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.39□□□□□ -2.03
Rnf180Q3U827 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Rnf180Q3U827 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm23599-201ENSMUST00000157261 251 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm23390-201ENSMUST00000157393 106 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm23080-201ENSMUST00000157846 103 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm24851-201ENSMUST00000158028 103 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm23223-201ENSMUST00000158119 127 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm22381-201ENSMUST00000158186 107 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm25920-201ENSMUST00000158307 99 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm23113-201ENSMUST00000158477 99 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Mir7059-201ENSMUST00000184825 59 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm27656-201ENSMUST00000185055 80 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Mir151-201ENSMUST00000083678 68 ntBASIC2.38□□□□□ -2.03
Rnf180Q3U827 Gm23772-201ENSMUST00000104433 102 ntBASIC2.37□□□□□ -2.03
Rnf180Q3U827 Gm26049-201ENSMUST00000157313 108 ntBASIC2.37□□□□□ -2.03
Rnf180Q3U827 Gm22612-201ENSMUST00000158293 101 ntBASIC2.37□□□□□ -2.03
Rnf180Q3U827 Gm25368-201ENSMUST00000158847 131 ntBASIC2.37□□□□□ -2.03
Rnf180Q3U827 Mir7052-201ENSMUST00000184821 65 ntBASIC2.37□□□□□ -2.03
Rnf180Q3U827 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.37□□□□□ -2.03
Rnf180Q3U827 Gm23651-201ENSMUST00000116755 120 ntBASIC2.36□□□□□ -2.03
Rnf180Q3U827 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.36□□□□□ -2.03
Rnf180Q3U827 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Rnf180Q3U827 Gm26339-201ENSMUST00000102368 99 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Mir1949-201ENSMUST00000157434 141 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Gm25831-201ENSMUST00000158924 163 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Gm27979-201ENSMUST00000185126 56 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Gm29603-201ENSMUST00000186792 334 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Gm25357-201ENSMUST00000082745 72 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Gm24038-201ENSMUST00000082872 159 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Mir423-201ENSMUST00000083584 109 ntBASIC2.35□□□□□ -2.03
Rnf180Q3U827 Mir669b-201ENSMUST00000102172 97 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm26154-201ENSMUST00000102339 96 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Snord100-201ENSMUST00000116836 74 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm24769-201ENSMUST00000158506 129 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm25161-201ENSMUST00000158913 132 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm23340-201ENSMUST00000158955 123 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Mir6388-201ENSMUST00000184417 75 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm22738-201ENSMUST00000083440 147 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Mir148b-201ENSMUST00000083626 97 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm25627-201ENSMUST00000084003 153 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm10351-201ENSMUST00000087694 125 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm23947-201ENSMUST00000093636 107 ntBASIC2.34□□□□□ -2.03
Rnf180Q3U827 Gm25882-201ENSMUST00000157784 85 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Gm25994-201ENSMUST00000175392 101 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Mir1954-201ENSMUST00000175595 86 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Gm27672-201ENSMUST00000183751 204 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Gm27722-201ENSMUST00000183908 76 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Gm25814-201ENSMUST00000082754 107 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Mir107-201ENSMUST00000083660 87 ntBASIC2.33□□□□□ -2.04
Rnf180Q3U827 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Rnf180Q3U827 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Rnf180Q3U827 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Rnf180Q3U827 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm24232-201ENSMUST00000104314 132 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm13246-201ENSMUST00000120994 315 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm25980-201ENSMUST00000157176 218 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm23329-201ENSMUST00000157415 108 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm25884-201ENSMUST00000157782 62 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm22349-201ENSMUST00000157864 107 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm22384-201ENSMUST00000158187 104 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm24668-201ENSMUST00000158935 104 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Mir7021-201ENSMUST00000197026 63 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm19855-201ENSMUST00000210145 249 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm10172-201ENSMUST00000085929 558 ntBASIC2.32□□□□□ -2.04
Rnf180Q3U827 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Rnf180Q3U827 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Rnf180Q3U827 Gm15281-201ENSMUST00000125181 351 ntBASIC2.31□□□□□ -2.04
Rnf180Q3U827 Mir1931-201ENSMUST00000158589 119 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 220.9 ms