Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm25491-201ENSMUST00000158733 308 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm25444-201ENSMUST00000158999 113 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Mir6350-201ENSMUST00000183639 105 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm27672-201ENSMUST00000183751 204 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Mir7225-201ENSMUST00000184178 54 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm44057-201ENSMUST00000204547 96 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm44921-201ENSMUST00000205290 301 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.92□□□□□ -2.1
Col28a1Q2UY11 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm25124-201ENSMUST00000083345 164 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm25684-201ENSMUST00000083941 107 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Col28a1Q2UY11 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Gm24984-201ENSMUST00000104454 133 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Snord11-201ENSMUST00000158468 84 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Gm23289-201ENSMUST00000175615 108 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Mir6950-201ENSMUST00000184438 73 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Gm37579-201ENSMUST00000194291 142 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Gm22866-201ENSMUST00000083947 177 ntBASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Col28a1Q2UY11 Gm24894-201ENSMUST00000122744 118 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm24783-201ENSMUST00000157639 100 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm22727-201ENSMUST00000158090 116 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm24842-201ENSMUST00000158681 54 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm22708-201ENSMUST00000158987 103 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm25069-201ENSMUST00000175238 86 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm25646-201ENSMUST00000178527 79 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm37557-201ENSMUST00000191640 139 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm45791-201ENSMUST00000212908 352 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Mir155-201ENSMUST00000083463 65 ntBASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Col28a1Q2UY11 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Mir758-201ENSMUST00000103260 81 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm23766-201ENSMUST00000103894 80 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24375-201ENSMUST00000104397 132 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25753-201ENSMUST00000116792 121 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm14502-201ENSMUST00000118154 113 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22558-201ENSMUST00000157326 95 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Mir669n-201ENSMUST00000158636 54 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25836-201ENSMUST00000158918 123 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25098-201ENSMUST00000177580 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm23356-201ENSMUST00000177610 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24027-201ENSMUST00000177611 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22511-201ENSMUST00000177628 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22630-201ENSMUST00000177781 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm23560-201ENSMUST00000177782 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25462-201ENSMUST00000177833 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm26059-201ENSMUST00000177865 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22255-201ENSMUST00000177933 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25146-201ENSMUST00000177976 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm23567-201ENSMUST00000178005 107 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25523-201ENSMUST00000178044 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24585-201ENSMUST00000178104 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22627-201ENSMUST00000178127 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22912-201ENSMUST00000178242 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24866-201ENSMUST00000178338 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22524-201ENSMUST00000178357 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25710-201ENSMUST00000178367 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm23575-201ENSMUST00000178406 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24872-201ENSMUST00000178434 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22449-201ENSMUST00000178924 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24702-201ENSMUST00000178965 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24206-201ENSMUST00000179011 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Mir669j-201ENSMUST00000179023 121 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24528-201ENSMUST00000179164 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm22909-201ENSMUST00000179190 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm26334-201ENSMUST00000179403 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25463-201ENSMUST00000179405 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25742-201ENSMUST00000179530 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25209-201ENSMUST00000179576 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm26392-201ENSMUST00000179661 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25230-201ENSMUST00000179740 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm26434-201ENSMUST00000179778 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm25741-201ENSMUST00000179825 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24759-201ENSMUST00000179827 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm24219-201ENSMUST00000179861 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm45654-201ENSMUST00000210980 123 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 AC147101.2-201ENSMUST00000219756 184 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Gm23254-201ENSMUST00000097244 79 ntBASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Col28a1Q2UY11 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm25090-201ENSMUST00000104000 132 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm23109-201ENSMUST00000116867 126 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm24837-201ENSMUST00000158683 81 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm27544-201ENSMUST00000185069 155 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm44408-201ENSMUST00000200205 66 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm7214-201ENSMUST00000222428 272 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Mir369-201ENSMUST00000083627 79 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.88□□□□□ -2.11
Col28a1Q2UY11 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms