Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Col17a1Q07563 Trbv18-201ENSMUST00000194256 294 ntBASIC3.1□□□□□ -1.91
Col17a1Q07563 Gm15235-201ENSMUST00000200572 194 ntBASIC3.1□□□□□ -1.91
Col17a1Q07563 Gm44429-201ENSMUST00000203542 186 ntBASIC3.1□□□□□ -1.91
Col17a1Q07563 Gm16976-205ENSMUST00000227324 226 ntBASIC3.1□□□□□ -1.91
Col17a1Q07563 Gm25789-201ENSMUST00000083294 76 ntBASIC3.1□□□□□ -1.91
Col17a1Q07563 Gm26168-201ENSMUST00000083787 112 ntBASIC3.1□□□□□ -1.91
Col17a1Q07563 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.1□□□□□ -1.91
Col17a1Q07563 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Col17a1Q07563 Snord71-201ENSMUST00000104361 85 ntBASIC3.09□□□□□ -1.91
Col17a1Q07563 Mir6399-201ENSMUST00000184050 84 ntBASIC3.09□□□□□ -1.91
Col17a1Q07563 Gm33962-201ENSMUST00000182643 2592 ntBASIC3.09□□□□□ -1.91
Col17a1Q07563 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col17a1Q07563 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Col17a1Q07563 Gm24677-201ENSMUST00000158755 150 ntBASIC3.09□□□□□ -1.92
Col17a1Q07563 Gm22929-201ENSMUST00000175517 107 ntBASIC3.09□□□□□ -1.92
Col17a1Q07563 Gm27365-201ENSMUST00000184041 177 ntBASIC3.09□□□□□ -1.92
Col17a1Q07563 Gm44240-201ENSMUST00000204015 2654 ntBASIC3.09□□□□□ -1.92
Col17a1Q07563 Gm45687-201ENSMUST00000209454 155 ntBASIC3.09□□□□□ -1.92
Col17a1Q07563 Gm23708-201ENSMUST00000104367 123 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Gm24246-201ENSMUST00000157315 132 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Scarna3b-201ENSMUST00000157533 139 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Gm25382-201ENSMUST00000157811 97 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Gm27934-201ENSMUST00000158795 63 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.08□□□□□ -1.92
Col17a1Q07563 Snord104-201ENSMUST00000083192 70 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Gm26175-201ENSMUST00000083794 131 ntBASIC3.08□□□□□ -1.92
Col17a1Q07563 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col17a1Q07563 Gm22946-201ENSMUST00000158558 82 ntBASIC3.07□□□□□ -1.92
Col17a1Q07563 Gm43680-201ENSMUST00000199466 340 ntBASIC3.07□□□□□ -1.92
Col17a1Q07563 Mir6962-201ENSMUST00000199512 63 ntBASIC3.07□□□□□ -1.92
Col17a1Q07563 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.07□□□□□ -1.92
Col17a1Q07563 Gm8219-201ENSMUST00000218309 242 ntBASIC3.07□□□□□ -1.92
Col17a1Q07563 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.07□□□□□ -1.92
Col17a1Q07563 Gm22686-201ENSMUST00000082847 100 ntBASIC3.07□□□□□ -1.92
Col17a1Q07563 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col17a1Q07563 Gm26405-201ENSMUST00000158495 100 ntBASIC3.06□□□□□ -1.92
Col17a1Q07563 AC139186.1-201ENSMUST00000197610 94 ntBASIC3.06□□□□□ -1.92
Col17a1Q07563 Gm22354-201ENSMUST00000083919 70 ntBASIC3.06□□□□□ -1.92
Col17a1Q07563 Gm26076-201ENSMUST00000104065 105 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm12934-201ENSMUST00000119221 343 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm25367-201ENSMUST00000158846 106 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm24086-201ENSMUST00000175171 98 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm37037-201ENSMUST00000194475 424 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm44976-201ENSMUST00000205543 261 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm22299-201ENSMUST00000082663 136 ntBASIC3.05□□□□□ -1.92
Col17a1Q07563 Gm14020-201ENSMUST00000118165 662 ntBASIC3.04□□□□□ -1.92
Col17a1Q07563 Gm26099-201ENSMUST00000157248 109 ntBASIC3.04□□□□□ -1.92
Col17a1Q07563 Gm24718-201ENSMUST00000157521 136 ntBASIC3.04□□□□□ -1.92
Col17a1Q07563 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.04□□□□□ -1.92
Col17a1Q07563 Gm3081-201ENSMUST00000193413 3025 ntBASIC3.04□□□□□ -1.92
Col17a1Q07563 Gm15289-201ENSMUST00000117793 244 ntBASIC3.03□□□□□ -1.92
Col17a1Q07563 Gm22790-201ENSMUST00000157229 129 ntBASIC3.03□□□□□ -1.92
Col17a1Q07563 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Col17a1Q07563 Gm23370-202ENSMUST00000197008 129 ntBASIC3.03□□□□□ -1.92
Col17a1Q07563 Gm23249-201ENSMUST00000083369 161 ntBASIC3.03□□□□□ -1.92
Col17a1Q07563 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Col17a1Q07563 Gm25610-201ENSMUST00000104016 129 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm23237-201ENSMUST00000104639 92 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm11786-201ENSMUST00000120799 155 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm25950-201ENSMUST00000175331 100 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm44358-201ENSMUST00000196301 98 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm42719-201ENSMUST00000197393 355 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Mir3069-201ENSMUST00000198802 65 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm22978-201ENSMUST00000082607 160 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm24099-201ENSMUST00000083384 107 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Gm22738-201ENSMUST00000083440 147 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.03□□□□□ -1.93
Col17a1Q07563 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Col17a1Q07563 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Col17a1Q07563 Gm22727-201ENSMUST00000158090 116 ntBASIC3.02□□□□□ -1.93
Col17a1Q07563 Gm26029-201ENSMUST00000158659 132 ntBASIC3.02□□□□□ -1.93
Col17a1Q07563 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC3.02□□□□□ -1.93
Col17a1Q07563 Gm22565-201ENSMUST00000175540 69 ntBASIC3.02□□□□□ -1.93
Col17a1Q07563 Gm25198-201ENSMUST00000178574 110 ntBASIC3.02□□□□□ -1.93
Col17a1Q07563 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC3.02□□□□□ -1.93
Col17a1Q07563 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.02□□□□□ -1.93
Col17a1Q07563 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Col17a1Q07563 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC3.01□□□□□ -1.93
Col17a1Q07563 Gm26249-201ENSMUST00000116708 118 ntBASIC3.01□□□□□ -1.93
Col17a1Q07563 Gm13913-201ENSMUST00000121126 260 ntBASIC3.01□□□□□ -1.93
Col17a1Q07563 Mir1951-201ENSMUST00000157981 89 ntBASIC3.01□□□□□ -1.93
Col17a1Q07563 Gm23476-201ENSMUST00000158881 274 ntBASIC3.01□□□□□ -1.93
Col17a1Q07563 Gm28825-201ENSMUST00000186233 238 ntBASIC3.01□□□□□ -1.93
Col17a1Q07563 AC144671.1-201ENSMUST00000215265 99 ntBASIC3.01□□□□□ -1.93
Col17a1Q07563 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Col17a1Q07563 Gm26473-201ENSMUST00000116763 127 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Gm23329-201ENSMUST00000157415 108 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Gm27520-201ENSMUST00000184872 81 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Gm18433-201ENSMUST00000192747 197 ntBASIC3□□□□□ -1.93
Col17a1Q07563 AC117232.1-201ENSMUST00000197964 119 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Mir34c-201ENSMUST00000083653 77 ntBASIC3□□□□□ -1.93
Col17a1Q07563 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col17a1Q07563 Gm22196-201ENSMUST00000116865 109 ntBASIC2.99□□□□□ -1.93
Col17a1Q07563 Gm25882-201ENSMUST00000157784 85 ntBASIC2.99□□□□□ -1.93
Col17a1Q07563 Gm26265-202ENSMUST00000196326 133 ntBASIC2.99□□□□□ -1.93
Col17a1Q07563 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 201.6 ms