Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Mir344e-201ENSMUST00000104677 66 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Mir293-201ENSMUST00000104841 80 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm22196-201ENSMUST00000116865 109 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm22163-201ENSMUST00000158408 135 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm44555-201ENSMUST00000209008 148 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm25636-201ENSMUST00000082666 133 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Gm26175-201ENSMUST00000083794 131 ntBASIC2.82□□□□□ -1.96
Col6a1Q04857 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.82□□□□□ -1.96
Col6a1Q04857 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Col6a1Q04857 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Col6a1Q04857 Mir547-201ENSMUST00000102051 78 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm22451-201ENSMUST00000122803 151 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm15281-201ENSMUST00000125181 351 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm26150-201ENSMUST00000157426 151 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm23670-201ENSMUST00000157469 119 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm22079-201ENSMUST00000157592 106 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm25978-201ENSMUST00000158698 90 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Mir7026-201ENSMUST00000184384 67 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm43512-201ENSMUST00000198495 176 ntBASIC2.81□□□□□ -1.96
Col6a1Q04857 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.81□□□□□ -1.96
Col6a1Q04857 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Col6a1Q04857 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm23950-201ENSMUST00000104026 129 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm23654-201ENSMUST00000116758 126 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm24632-201ENSMUST00000122770 323 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm23817-201ENSMUST00000158449 104 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Rnu7-201ENSMUST00000158458 62 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm27786-201ENSMUST00000184337 70 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm44464-201ENSMUST00000198010 138 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Gm45429-201ENSMUST00000209527 172 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Mir322-201ENSMUST00000083484 95 ntBASIC2.8□□□□□ -1.96
Col6a1Q04857 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Col6a1Q04857 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a1Q04857 Gm25771-201ENSMUST00000158565 144 ntBASIC2.79□□□□□ -1.96
Col6a1Q04857 Gm26864-201ENSMUST00000181346 156 ntBASIC2.79□□□□□ -1.96
Col6a1Q04857 Gm28669-201ENSMUST00000188400 100 ntBASIC2.79□□□□□ -1.96
Col6a1Q04857 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Col6a1Q04857 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.79□□□□□ -1.96
Col6a1Q04857 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.79□□□□□ -1.96
Col6a1Q04857 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Col6a1Q04857 BC022960-201ENSMUST00000119987 1815 ntBASIC2.79□□□□□ -1.96
Col6a1Q04857 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.78□□□□□ -1.96
Col6a1Q04857 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm26421-201ENSMUST00000104279 132 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm25878-201ENSMUST00000104327 93 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm26104-201ENSMUST00000157250 108 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm22803-201ENSMUST00000158049 283 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm25769-201ENSMUST00000158569 127 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col6a1Q04857 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Col6a1Q04857 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.77□□□□□ -1.97
Col6a1Q04857 Gm22752-201ENSMUST00000102083 109 ntBASIC2.77□□□□□ -1.97
Col6a1Q04857 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.77□□□□□ -1.97
Col6a1Q04857 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.77□□□□□ -1.97
Col6a1Q04857 Gm24536-201ENSMUST00000083144 107 ntBASIC2.77□□□□□ -1.97
Col6a1Q04857 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Col6a1Q04857 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.77□□□□□ -1.97
Col6a1Q04857 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col6a1Q04857 Gm26076-201ENSMUST00000104065 105 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm26051-201ENSMUST00000104642 93 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm14400-201ENSMUST00000117234 2135 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm25371-201ENSMUST00000158162 101 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm26498-201ENSMUST00000177799 79 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm8034-201ENSMUST00000178853 132 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm26230-201ENSMUST00000180141 79 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Snord118-201ENSMUST00000082965 135 ntBASIC2.76□□□□□ -1.97
Col6a1Q04857 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Col6a1Q04857 Gm22387-201ENSMUST00000158191 131 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm22416-201ENSMUST00000158590 88 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm25711-201ENSMUST00000158633 128 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm25119-201ENSMUST00000158815 88 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm23548-201ENSMUST00000158963 106 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm23090-201ENSMUST00000177331 78 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Mir6997-201ENSMUST00000184313 71 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm42807-201ENSMUST00000200141 329 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm35736-201ENSMUST00000203681 313 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm44903-201ENSMUST00000206840 130 ntBASIC2.75□□□□□ -1.97
Col6a1Q04857 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col6a1Q04857 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Col6a1Q04857 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Col6a1Q04857 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm26420-201ENSMUST00000104273 103 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Snora36b-201ENSMUST00000104383 132 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm14671-201ENSMUST00000121790 262 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm23983-201ENSMUST00000157142 114 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm25558-201ENSMUST00000158083 106 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Mir7017-201ENSMUST00000184894 62 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm9156-201ENSMUST00000189660 463 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Col6a1Q04857 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Mir34a-201ENSMUST00000083559 102 ntBASIC2.74□□□□□ -1.97
Col6a1Q04857 Mir29c-201ENSMUST00000083614 88 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms