Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Mir293-201ENSMUST00000104841 80 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm24250-201ENSMUST00000157320 135 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm22731-201ENSMUST00000158086 94 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm23898-201ENSMUST00000158111 103 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm22387-201ENSMUST00000158191 131 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm24947-201ENSMUST00000158334 110 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm23770-201ENSMUST00000178009 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm22832-201ENSMUST00000178022 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm23863-201ENSMUST00000178265 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm24828-201ENSMUST00000178507 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm23052-201ENSMUST00000178633 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm25729-201ENSMUST00000179050 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm25359-201ENSMUST00000179315 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm22624-201ENSMUST00000179913 108 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Gm27878-201ENSMUST00000184000 106 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Mir34a-201ENSMUST00000083559 102 ntBASIC2.47□□□□□ -2.01
Msx2Q03358 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
Msx2Q03358 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.46□□□□□ -2.02
Msx2Q03358 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.46□□□□□ -2.02
Msx2Q03358 Gm22515-201ENSMUST00000158273 305 ntBASIC2.46□□□□□ -2.02
Msx2Q03358 Mir6376-201ENSMUST00000185149 131 ntBASIC2.46□□□□□ -2.02
Msx2Q03358 Snora41-201ENSMUST00000082668 132 ntBASIC2.46□□□□□ -2.02
Msx2Q03358 Snora33-201ENSMUST00000093556 129 ntBASIC2.46□□□□□ -2.02
Msx2Q03358 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.46□□□□□ -2.02
Msx2Q03358 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Msx2Q03358 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Msx2Q03358 Gm26345-201ENSMUST00000157534 120 ntBASIC2.45□□□□□ -2.02
Msx2Q03358 Gm22332-201ENSMUST00000158072 126 ntBASIC2.45□□□□□ -2.02
Msx2Q03358 Gm23223-201ENSMUST00000158119 127 ntBASIC2.45□□□□□ -2.02
Msx2Q03358 Gm25371-201ENSMUST00000158162 101 ntBASIC2.45□□□□□ -2.02
Msx2Q03358 Mir6377-201ENSMUST00000183760 114 ntBASIC2.45□□□□□ -2.02
Msx2Q03358 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Msx2Q03358 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Msx2Q03358 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Msx2Q03358 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm26339-201ENSMUST00000102368 99 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm11792-201ENSMUST00000120640 168 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm24475-201ENSMUST00000157435 143 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm25884-201ENSMUST00000157782 62 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm24350-202ENSMUST00000198309 132 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm23790-201ENSMUST00000083013 107 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm22154-201ENSMUST00000083844 131 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm22354-201ENSMUST00000083919 70 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Gm25628-201ENSMUST00000084002 105 ntBASIC2.44□□□□□ -2.02
Msx2Q03358 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
Msx2Q03358 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Msx2Q03358 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Gm24280-201ENSMUST00000104237 134 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Gm20718-201ENSMUST00000176058 259 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Gm27379-201ENSMUST00000183730 123 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Gm43722-201ENSMUST00000196054 124 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Gm44393-201ENSMUST00000197418 138 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Gm45544-201ENSMUST00000211130 88 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.43□□□□□ -2.02
Msx2Q03358 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Msx2Q03358 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.42□□□□□ -2.02
Msx2Q03358 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Msx2Q03358 Gm20409-201ENSMUST00000173457 130 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Mir7014-201ENSMUST00000183853 63 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Gm44325-201ENSMUST00000196757 77 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Msx2Q03358 Gm44555-201ENSMUST00000209008 148 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Gm24038-201ENSMUST00000082872 159 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Gm23249-201ENSMUST00000083369 161 ntBASIC2.42□□□□□ -2.02
Msx2Q03358 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.42□□□□□ -2.02
Msx2Q03358 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Msx2Q03358 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Msx2Q03358 Gm24068-201ENSMUST00000104513 132 ntBASIC2.41□□□□□ -2.02
Msx2Q03358 Gm25887-201ENSMUST00000157777 84 ntBASIC2.41□□□□□ -2.02
Msx2Q03358 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.41□□□□□ -2.02
Msx2Q03358 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.41□□□□□ -2.02
Msx2Q03358 Gm22283-201ENSMUST00000082556 161 ntBASIC2.41□□□□□ -2.02
Msx2Q03358 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.41□□□□□ -2.02
Msx2Q03358 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.4□□□□□ -2.02
Msx2Q03358 Gm22486-201ENSMUST00000116815 137 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Gm16021-201ENSMUST00000121176 219 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Gm22319-201ENSMUST00000157147 122 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Gm23668-201ENSMUST00000157465 111 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Gm23083-201ENSMUST00000157851 116 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Mir3961-201ENSMUST00000198795 59 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Gm42960-201ENSMUST00000202160 241 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Gm8031-201ENSMUST00000213430 626 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 Mir301-201ENSMUST00000083655 86 ntBASIC2.4□□□□□ -2.03
Msx2Q03358 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Msx2Q03358 Gm25090-201ENSMUST00000104000 132 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm25539-201ENSMUST00000116886 122 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm22338-201ENSMUST00000157715 129 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm25373-201ENSMUST00000158156 115 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm22770-201ENSMUST00000158368 67 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm24345-201ENSMUST00000158706 124 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm24816-201ENSMUST00000175311 151 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm25633-201ENSMUST00000178565 107 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm25528-201ENSMUST00000180264 132 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm22249-201ENSMUST00000082485 136 ntBASIC2.39□□□□□ -2.03
Msx2Q03358 Gm22805-201ENSMUST00000082739 107 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms