Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm25017-201ENSMUST00000179805 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm23618-201ENSMUST00000179912 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm26284-201ENSMUST00000180107 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24570-201ENSMUST00000180314 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm24654-201ENSMUST00000180315 79 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm23370-201ENSMUST00000199545 130 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.32□□□□□ -2.04
Usp4P35123 Gm25409-201ENSMUST00000083764 131 ntBASIC2.32□□□□□ -2.04
Usp4P35123 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Usp4P35123 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.31□□□□□ -2.04
Usp4P35123 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Gm14709-201ENSMUST00000121225 304 ntBASIC2.31□□□□□ -2.04
Usp4P35123 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Usp4P35123 Gm23434-201ENSMUST00000157179 100 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Gm22264-201ENSMUST00000178200 107 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Usp4P35123 Gm43381-201ENSMUST00000198553 165 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Mir7217-201ENSMUST00000200304 62 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.31□□□□□ -2.04
Usp4P35123 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Gm24044-201ENSMUST00000083107 156 ntBASIC2.31□□□□□ -2.04
Usp4P35123 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Usp4P35123 Gm22554-201ENSMUST00000157798 147 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm23859-201ENSMUST00000158383 64 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm25771-201ENSMUST00000158565 144 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm27668-201ENSMUST00000184188 120 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm19855-201ENSMUST00000210145 249 ntBASIC2.3□□□□□ -2.04
Usp4P35123 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm22576-201ENSMUST00000083733 104 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.3□□□□□ -2.04
Usp4P35123 Gm24171-201ENSMUST00000104126 131 ntBASIC2.29□□□□□ -2.04
Usp4P35123 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm14568-201ENSMUST00000119321 294 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm24900-201ENSMUST00000158128 134 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm24668-201ENSMUST00000158935 104 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm25402-201ENSMUST00000082966 131 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm26326-201ENSMUST00000083070 129 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Mir34a-201ENSMUST00000083559 102 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm24030-201ENSMUST00000083931 164 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Gm22866-201ENSMUST00000083947 177 ntBASIC2.29□□□□□ -2.04
Usp4P35123 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Usp4P35123 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Usp4P35123 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Usp4P35123 Mir344e-201ENSMUST00000104677 66 ntBASIC2.28□□□□□ -2.04
Usp4P35123 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.28□□□□□ -2.04
Usp4P35123 Gm22099-201ENSMUST00000157925 123 ntBASIC2.28□□□□□ -2.04
Usp4P35123 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.28□□□□□ -2.04
Usp4P35123 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.28□□□□□ -2.04
Usp4P35123 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.28□□□□□ -2.04
Usp4P35123 BC022960-201ENSMUST00000119987 1815 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm14671-201ENSMUST00000121790 262 ntBASIC2.27□□□□□ -2.05
Usp4P35123 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm24246-201ENSMUST00000157315 132 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm24842-201ENSMUST00000158681 54 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm22093-201ENSMUST00000158980 111 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm26864-201ENSMUST00000181346 156 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm37557-201ENSMUST00000191640 139 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm43602-201ENSMUST00000196772 300 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gm3724-201ENSMUST00000197957 349 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Mir429-201ENSMUST00000083493 83 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Usp4P35123 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.27□□□□□ -2.05
Usp4P35123 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Usp4P35123 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.26□□□□□ -2.05
Usp4P35123 Gm23951-201ENSMUST00000104029 132 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Gm25878-201ENSMUST00000104327 93 ntBASIC2.26□□□□□ -2.05
Usp4P35123 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.26□□□□□ -2.05
Usp4P35123 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Mir1931-201ENSMUST00000158589 119 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Gm24926-201ENSMUST00000178053 79 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Gm22632-201ENSMUST00000178266 79 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Gm23509-201ENSMUST00000083080 160 ntBASIC2.26□□□□□ -2.05
Usp4P35123 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Usp4P35123 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Usp4P35123 Snord64-201ENSMUST00000104003 67 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Gm23011-201ENSMUST00000104148 132 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Gm25623-201ENSMUST00000157216 108 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Gm23253-201ENSMUST00000157441 104 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Gm26415-201ENSMUST00000157673 292 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Mir7226-201ENSMUST00000184953 60 ntBASIC2.25□□□□□ -2.05
Usp4P35123 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Gm25788-201ENSMUST00000082721 131 ntBASIC2.25□□□□□ -2.05
Usp4P35123 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Usp4P35123 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Usp4P35123 Gm25094-201ENSMUST00000103992 131 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Gm26420-201ENSMUST00000104273 103 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Gm23197-201ENSMUST00000158809 112 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.24□□□□□ -2.05
Usp4P35123 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Usp4P35123 Gm26077-201ENSMUST00000104064 123 ntBASIC2.23□□□□□ -2.05
Usp4P35123 Gm22796-201ENSMUST00000157234 106 ntBASIC2.23□□□□□ -2.05
Usp4P35123 Gm25460-201ENSMUST00000157954 127 ntBASIC2.23□□□□□ -2.05
Usp4P35123 Gm20477-201ENSMUST00000174028 280 ntBASIC2.23□□□□□ -2.05
Usp4P35123 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.23□□□□□ -2.05
Usp4P35123 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.23□□□□□ -2.05
Usp4P35123 Gm22283-201ENSMUST00000082556 161 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms