Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm6105-201ENSMUST00000200580 624 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Col2a1P28481 Gm26225-201ENSMUST00000082508 135 ntBASIC1.11□□□□□ -2.23
Col2a1P28481 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm24579-201ENSMUST00000103964 144 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Snord89-201ENSMUST00000104516 110 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm13797-201ENSMUST00000121792 120 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm14491-201ENSMUST00000121919 199 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm11204-201ENSMUST00000122438 147 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm25783-201ENSMUST00000122525 190 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm22553-201ENSMUST00000157797 295 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm23545-201ENSMUST00000158205 104 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm25015-201ENSMUST00000158400 128 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm24634-201ENSMUST00000158672 107 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm25994-201ENSMUST00000175392 101 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm23864-201ENSMUST00000177607 107 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm27722-201ENSMUST00000183908 76 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm44483-201ENSMUST00000197203 97 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Gm44853-201ENSMUST00000209070 250 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 AC122320.1-201ENSMUST00000227233 105 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Snord82-201ENSMUST00000082889 70 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Mir384-201ENSMUST00000083565 88 ntBASIC1.1□□□□□ -2.23
Col2a1P28481 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
Col2a1P28481 Gm26293-201ENSMUST00000104170 84 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Mir1904-201ENSMUST00000122702 80 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm23390-201ENSMUST00000157393 106 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm25884-201ENSMUST00000157782 62 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm22431-201ENSMUST00000158545 107 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm16162-201ENSMUST00000162296 297 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Col2a1P28481 Snord87-201ENSMUST00000175437 87 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Mir669k-201ENSMUST00000177742 127 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm25673-201ENSMUST00000179957 127 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm28344-201ENSMUST00000185704 279 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm37693-201ENSMUST00000194562 234 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm45002-201ENSMUST00000208045 120 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm5010-201ENSMUST00000213131 260 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Gm24805-201ENSMUST00000082931 104 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Snord118-201ENSMUST00000082965 135 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Snora3-201ENSMUST00000083082 132 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Mir429-201ENSMUST00000083493 83 ntBASIC1.09□□□□□ -2.24
Col2a1P28481 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.09□□□□□ -2.24
Col2a1P28481 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Snord19-201ENSMUST00000104609 76 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Col2a1P28481 Snord13-201ENSMUST00000157627 104 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm25935-201ENSMUST00000178746 107 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm22510-201ENSMUST00000179304 79 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm26336-201ENSMUST00000179449 79 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm26390-201ENSMUST00000179628 79 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm27476-201ENSMUST00000183366 104 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm27803-201ENSMUST00000183763 119 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm29603-201ENSMUST00000186792 334 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm25634-201ENSMUST00000082667 105 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Gm22169-201ENSMUST00000083229 107 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Mir300-201ENSMUST00000083485 79 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Mir151-201ENSMUST00000083678 68 ntBASIC1.08□□□□□ -2.24
Col2a1P28481 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Col2a1P28481 Gm24867-201ENSMUST00000104161 107 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm25497-201ENSMUST00000104425 132 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm13801-201ENSMUST00000120750 160 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm15861-201ENSMUST00000120979 339 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm13560-201ENSMUST00000121865 329 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.07□□□□□ -2.24
Col2a1P28481 Gm26150-201ENSMUST00000157426 151 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm24851-201ENSMUST00000158028 103 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm24510-201ENSMUST00000174965 94 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Mir6419-201ENSMUST00000184784 113 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm38183-201ENSMUST00000193189 205 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm44491-201ENSMUST00000196794 96 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.07□□□□□ -2.24
Col2a1P28481 Mir155-201ENSMUST00000083463 65 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.07□□□□□ -2.24
Col2a1P28481 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm14674-201ENSMUST00000117816 342 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm14536-201ENSMUST00000118324 138 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm12771-201ENSMUST00000120246 135 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm15027-201ENSMUST00000120922 138 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm6025-201ENSMUST00000121517 201 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm26358-201ENSMUST00000158215 97 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm23194-201ENSMUST00000158813 105 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Mir3057-201ENSMUST00000175040 91 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm27607-201ENSMUST00000185162 122 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm37624-201ENSMUST00000193751 219 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm25357-201ENSMUST00000082745 72 ntBASIC1.06□□□□□ -2.24
Col2a1P28481 Gm24375-201ENSMUST00000104397 132 ntBASIC1.05□□□□□ -2.24
Col2a1P28481 Mir1949-201ENSMUST00000157434 141 ntBASIC1.05□□□□□ -2.24
Col2a1P28481 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Col2a1P28481 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.05□□□□□ -2.24
Col2a1P28481 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.05□□□□□ -2.24
Col2a1P28481 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.05□□□□□ -2.24
Col2a1P28481 Gm24536-201ENSMUST00000083144 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms