Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm22984-201ENSMUST00000122751 122 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Gm22553-201ENSMUST00000157797 295 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Gm23340-201ENSMUST00000158955 123 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Mir6540-201ENSMUST00000184886 108 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Gm25820-201ENSMUST00000198589 127 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Gm44211-201ENSMUST00000204867 145 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Gm24527-201ENSMUST00000082920 107 ntBASIC0.32□□□□□ -2.36
Sdc1P18828 Mir759-201ENSMUST00000103254 98 ntBASIC0.31□□□□□ -2.36
Sdc1P18828 Gm22032-201ENSMUST00000116946 116 ntBASIC0.31□□□□□ -2.36
Sdc1P18828 Gm25901-201ENSMUST00000158494 130 ntBASIC0.31□□□□□ -2.36
Sdc1P18828 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.31□□□□□ -2.36
Sdc1P18828 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.31□□□□□ -2.36
Sdc1P18828 Gm23377-201ENSMUST00000082943 126 ntBASIC0.31□□□□□ -2.36
Sdc1P18828 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Sdc1P18828 Gm6272-201ENSMUST00000121256 171 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 Gm13725-201ENSMUST00000122139 207 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 Gm24737-201ENSMUST00000158861 100 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 Gm16307-201ENSMUST00000161269 210 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 Gm23416-201ENSMUST00000175520 95 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 Gm22118-201ENSMUST00000175593 171 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.3□□□□□ -2.36
Sdc1P18828 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.3□□□□□ -2.36
Sdc1P18828 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.29□□□□□ -2.36
Sdc1P18828 Gm22565-201ENSMUST00000175540 69 ntBASIC0.29□□□□□ -2.36
Sdc1P18828 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Sdc1P18828 Gm38109-201ENSMUST00000195386 181 ntBASIC0.29□□□□□ -2.36
Sdc1P18828 Gm44055-201ENSMUST00000204376 247 ntBASIC0.29□□□□□ -2.36
Sdc1P18828 Mir30a-201ENSMUST00000083471 71 ntBASIC0.29□□□□□ -2.36
Sdc1P18828 Mir410-201ENSMUST00000083563 81 ntBASIC0.29□□□□□ -2.36
Sdc1P18828 Gm22759-201ENSMUST00000102276 96 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm22469-201ENSMUST00000104118 133 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm24275-201ENSMUST00000116780 146 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm15030-201ENSMUST00000119804 484 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm14301-201ENSMUST00000120181 324 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm12771-201ENSMUST00000120246 135 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm25318-201ENSMUST00000122554 314 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm22706-201ENSMUST00000157907 112 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm22387-201ENSMUST00000158191 131 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm24547-201ENSMUST00000158649 149 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm24634-201ENSMUST00000158672 107 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm23375-201ENSMUST00000175407 83 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.28□□□□□ -2.36
Sdc1P18828 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.28□□□□□ -2.36
Sdc1P18828 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
Sdc1P18828 Gm24171-201ENSMUST00000104126 131 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm22709-201ENSMUST00000116893 111 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm24476-201ENSMUST00000157437 131 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm22983-201ENSMUST00000158308 104 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm25976-201ENSMUST00000158695 130 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm36189-201ENSMUST00000204113 523 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.27□□□□□ -2.37
Sdc1P18828 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
Sdc1P18828 Mir547-201ENSMUST00000102051 78 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Gm25110-201ENSMUST00000116684 121 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Gm25775-201ENSMUST00000116716 121 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Gm24795-201ENSMUST00000116737 121 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Gm25171-201ENSMUST00000116926 121 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Gm25882-201ENSMUST00000157784 85 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Gm45673-201ENSMUST00000210293 358 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.26□□□□□ -2.37
Sdc1P18828 Snord69-201ENSMUST00000104024 80 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm22673-201ENSMUST00000104415 131 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm15289-201ENSMUST00000117793 244 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm12837-201ENSMUST00000120131 373 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm13246-201ENSMUST00000120994 315 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Mir5624-201ENSMUST00000176635 61 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm37404-201ENSMUST00000195726 359 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm45541-201ENSMUST00000210443 54 ntBASIC0.25□□□□□ -2.37
Sdc1P18828 Gm25875-201ENSMUST00000104323 107 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm15069-201ENSMUST00000117792 192 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm15068-201ENSMUST00000119796 192 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm14919-201ENSMUST00000120839 390 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm15213-201ENSMUST00000122098 216 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm26482-201ENSMUST00000158015 62 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm23763-201ENSMUST00000158345 60 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm22887-201ENSMUST00000178586 107 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm23186-201ENSMUST00000180078 107 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm28211-201ENSMUST00000190920 315 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.24□□□□□ -2.37
Sdc1P18828 Gm45005-201ENSMUST00000206640 157 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm44858-201ENSMUST00000207360 154 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm25814-201ENSMUST00000082754 107 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Gm24258-201ENSMUST00000083739 133 ntBASIC0.24□□□□□ -2.37
Sdc1P18828 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Sdc1P18828 Gm23605-201ENSMUST00000157255 127 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm26116-201ENSMUST00000175600 77 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm22450-201ENSMUST00000179641 107 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm25473-201ENSMUST00000180191 107 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm28418-201ENSMUST00000186179 423 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm25142-201ENSMUST00000082698 107 ntBASIC0.23□□□□□ -2.37
Sdc1P18828 Gm24856-201ENSMUST00000082809 107 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms