Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm12924-201ENSMUST00000121747 318 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm24385-201ENSMUST00000122694 350 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm23982-201ENSMUST00000157141 106 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm24501-201ENSMUST00000158452 62 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm22888-201ENSMUST00000158640 77 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm23024-201ENSMUST00000158770 292 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm25949-201ENSMUST00000175333 114 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Cdx1P18111 Mir6389-201ENSMUST00000183661 102 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm28418-201ENSMUST00000186179 423 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm28925-201ENSMUST00000188586 168 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm43563-201ENSMUST00000196761 198 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm22809-201ENSMUST00000082743 156 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 Gm24204-201ENSMUST00000082950 107 ntBASIC0.42□□□□□ -2.34
Cdx1P18111 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Cdx1P18111 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm27723-201ENSMUST00000157398 63 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm22163-201ENSMUST00000158408 135 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm22200-201ENSMUST00000158614 67 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm16546-201ENSMUST00000159442 355 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm29512-201ENSMUST00000185544 315 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm29665-201ENSMUST00000191457 528 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm37313-201ENSMUST00000191673 290 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm42988-201ENSMUST00000198116 225 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Gm45616-201ENSMUST00000211711 319 ntBASIC0.41□□□□□ -2.34
Cdx1P18111 Mir654-201ENSMUST00000104787 84 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 Gm13725-201ENSMUST00000122139 207 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 Gm23665-201ENSMUST00000158054 62 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 Gm25643-201ENSMUST00000158874 103 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 Gm44959-201ENSMUST00000209127 231 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.4□□□□□ -2.35
Cdx1P18111 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.4□□□□□ -2.35
Cdx1P18111 Gm22421-201ENSMUST00000083058 107 ntBASIC0.4□□□□□ -2.35
Cdx1P18111 Mir709-201ENSMUST00000102190 88 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Cdx1P18111 Gm22984-201ENSMUST00000122751 122 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Gm22097-201ENSMUST00000157929 278 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Gm23180-201ENSMUST00000158686 125 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Gm23194-201ENSMUST00000158813 105 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Mir5624-201ENSMUST00000176635 61 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Gm25615-201ENSMUST00000177836 94 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.39□□□□□ -2.35
Cdx1P18111 Gm29140-201ENSMUST00000190187 476 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
Cdx1P18111 Gm44948-201ENSMUST00000209050 149 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.39□□□□□ -2.35
Cdx1P18111 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Cdx1P18111 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Cdx1P18111 Gm25497-201ENSMUST00000104425 132 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Mir1197-201ENSMUST00000117037 120 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm13711-201ENSMUST00000119708 453 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm22321-201ENSMUST00000157152 104 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm23584-201ENSMUST00000157655 129 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm25558-201ENSMUST00000158083 106 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Mir1931-201ENSMUST00000158589 119 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm27980-201ENSMUST00000184094 169 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm28256-201ENSMUST00000188953 139 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm28559-201ENSMUST00000190532 139 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm43432-201ENSMUST00000196352 121 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm44468-201ENSMUST00000199516 105 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm45005-201ENSMUST00000206640 157 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm44858-201ENSMUST00000207360 154 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 AC166341.3-201ENSMUST00000221861 114 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Snora19-201ENSMUST00000082962 132 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm23658-201ENSMUST00000083233 132 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm25793-201ENSMUST00000083287 107 ntBASIC0.38□□□□□ -2.35
Cdx1P18111 Gm23941-201ENSMUST00000101953 107 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Mir669f-201ENSMUST00000103850 121 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm6272-201ENSMUST00000121256 171 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm15213-201ENSMUST00000122098 216 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm26479-201ENSMUST00000122620 106 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm25968-201ENSMUST00000157167 100 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm24963-201ENSMUST00000157916 144 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm26482-201ENSMUST00000158015 62 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm27289-201ENSMUST00000183341 82 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Mir6350-201ENSMUST00000183639 105 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm27845-201ENSMUST00000184479 114 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm42594-201ENSMUST00000199511 246 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm24765-201ENSMUST00000083691 103 ntBASIC0.37□□□□□ -2.35
Cdx1P18111 Gm14946-201ENSMUST00000119859 296 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm24909-201ENSMUST00000157290 280 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm24476-201ENSMUST00000157437 131 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm24015-201ENSMUST00000157725 232 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm22836-201ENSMUST00000158441 61 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm24345-201ENSMUST00000158706 124 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm26073-201ENSMUST00000179906 127 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm28008-201ENSMUST00000184021 186 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Gm28849-201ENSMUST00000188127 174 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.36□□□□□ -2.35
Cdx1P18111 Mir7227-201ENSMUST00000200408 59 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms