Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm15027-201ENSMUST00000120922 138 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm25102-201ENSMUST00000122479 112 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm24005-201ENSMUST00000158459 296 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm23421-201ENSMUST00000158934 104 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm23093-201ENSMUST00000083450 102 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.38□□□□□ -2.47
Col1a1P11087 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-0.38□□□□□ -2.47
Col1a1P11087 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Col1a1P11087 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 Gm28418-201ENSMUST00000186179 423 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.39□□□□□ -2.47
Col1a1P11087 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.4□□□□□ -2.47
Col1a1P11087 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Mir1931-201ENSMUST00000158589 119 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm24618-201ENSMUST00000177718 94 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm23953-201ENSMUST00000178214 94 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm26332-201ENSMUST00000179813 94 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm22863-201ENSMUST00000180265 94 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm27639-201ENSMUST00000184937 85 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Mir721-201ENSMUST00000200230 88 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.4□□□□□ -2.47
Col1a1P11087 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.41□□□□□ -2.47
Col1a1P11087 Gm23819-201ENSMUST00000158744 109 ntBASIC-0.41□□□□□ -2.47
Col1a1P11087 Gm22887-201ENSMUST00000178586 107 ntBASIC-0.41□□□□□ -2.47
Col1a1P11087 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.41□□□□□ -2.47
Col1a1P11087 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.41□□□□□ -2.47
Col1a1P11087 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.41□□□□□ -2.47
Col1a1P11087 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm23113-201ENSMUST00000158477 99 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Snord8-201ENSMUST00000175303 110 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm28196-201ENSMUST00000187719 640 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm38213-201ENSMUST00000193203 173 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm42857-201ENSMUST00000200823 339 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.41□□□□□ -2.48
Col1a1P11087 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm22885-201ENSMUST00000157410 107 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm25494-201ENSMUST00000158143 100 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm23523-201ENSMUST00000180190 107 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm28766-201ENSMUST00000191086 234 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.42□□□□□ -2.48
Col1a1P11087 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm26203-201ENSMUST00000082911 114 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Mir377-201ENSMUST00000083504 68 ntBASIC-0.42□□□□□ -2.48
Col1a1P11087 Gm14671-201ENSMUST00000121790 262 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm25015-201ENSMUST00000158400 128 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm22450-201ENSMUST00000179641 107 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm44142-201ENSMUST00000203358 311 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm36189-201ENSMUST00000204113 523 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm45508-201ENSMUST00000209298 299 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 AC129208.2-201ENSMUST00000228506 320 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm23614-201ENSMUST00000082598 107 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Mir451a-201ENSMUST00000093557 72 ntBASIC-0.43□□□□□ -2.48
Col1a1P11087 Gm24375-201ENSMUST00000104397 132 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.44□□□□□ -2.48
Col1a1P11087 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms