Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm22689-201ENSMUST00000102452 110 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Mir669f-201ENSMUST00000103850 121 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Mir466h-201ENSMUST00000104748 81 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Col5a1O88207 Gm14536-201ENSMUST00000118324 138 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm15027-201ENSMUST00000120922 138 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm23605-201ENSMUST00000157255 127 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm23278-201ENSMUST00000157911 143 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm23182-201ENSMUST00000158688 135 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Mir3961-201ENSMUST00000198795 59 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm35736-201ENSMUST00000203681 313 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm8219-201ENSMUST00000218309 242 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Snord82-201ENSMUST00000082889 70 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm25513-201ENSMUST00000083861 162 ntBASIC0.87□□□□□ -2.27
Col5a1O88207 Gm13560-201ENSMUST00000121865 329 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Col5a1O88207 Gm26279-201ENSMUST00000157095 102 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm22279-201ENSMUST00000157200 93 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm25390-201ENSMUST00000157341 103 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm22485-201ENSMUST00000157990 109 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm25267-201ENSMUST00000158522 63 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm16546-201ENSMUST00000159442 355 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Col5a1O88207 Gm27722-201ENSMUST00000183908 76 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Mir6388-201ENSMUST00000184417 75 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm28862-201ENSMUST00000188246 163 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm9156-201ENSMUST00000189660 463 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Snord43-201ENSMUST00000199549 108 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 CU062626.2-201ENSMUST00000223953 274 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm25204-201ENSMUST00000082843 106 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm24536-201ENSMUST00000083144 107 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Mir471-201ENSMUST00000093596 67 ntBASIC0.86□□□□□ -2.27
Col5a1O88207 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Col5a1O88207 Gm14922-201ENSMUST00000121131 163 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm23983-201ENSMUST00000157142 114 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.85□□□□□ -2.27
Col5a1O88207 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC0.85□□□□□ -2.27
Col5a1O88207 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm26204-201ENSMUST00000082906 107 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm22421-201ENSMUST00000083058 107 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Mir429-201ENSMUST00000083493 83 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
Col5a1O88207 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm25371-201ENSMUST00000158162 101 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm17052-201ENSMUST00000165496 289 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm23090-201ENSMUST00000177331 78 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm27928-201ENSMUST00000183747 256 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Mir6481-201ENSMUST00000184617 110 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm28537-201ENSMUST00000189026 315 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm29631-201ENSMUST00000191065 315 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm29014-201ENSMUST00000191422 326 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm25634-201ENSMUST00000082667 105 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm24920-201ENSMUST00000083018 85 ntBASIC0.85□□□□□ -2.27
Col5a1O88207 Gm24381-201ENSMUST00000122697 104 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 Gm23854-201ENSMUST00000158378 108 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 Gm16162-201ENSMUST00000162296 297 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.84□□□□□ -2.28
Col5a1O88207 Gm29308-201ENSMUST00000188863 315 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 AC122320.1-201ENSMUST00000227233 105 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.28
Col5a1O88207 Gm43484-201ENSMUST00000198333 5966 ntBASIC0.84□□□□□ -2.28
Col5a1O88207 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Col5a1O88207 Gm26026-201ENSMUST00000122726 123 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm22586-201ENSMUST00000157507 122 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm22217-201ENSMUST00000157556 313 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm22989-201ENSMUST00000158313 86 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm25994-201ENSMUST00000175392 101 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm25996-201ENSMUST00000175393 117 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm23864-201ENSMUST00000177607 107 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm6003-201ENSMUST00000187903 463 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.83□□□□□ -2.28
Col5a1O88207 Gm44491-201ENSMUST00000196794 96 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm43199-201ENSMUST00000200019 307 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm6105-201ENSMUST00000200580 624 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Mir384-201ENSMUST00000083565 88 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Mir146-201ENSMUST00000083667 65 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm10360-201ENSMUST00000097219 272 ntBASIC0.83□□□□□ -2.28
Col5a1O88207 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Col5a1O88207 Gm25541-201ENSMUST00000116888 126 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm24595-201ENSMUST00000122501 110 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.82□□□□□ -2.28
Col5a1O88207 Gm22559-201ENSMUST00000157329 134 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm24750-201ENSMUST00000157843 104 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Mir669k-201ENSMUST00000177742 127 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm22911-201ENSMUST00000177920 107 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm25673-201ENSMUST00000179957 127 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm43563-201ENSMUST00000196761 198 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.82□□□□□ -2.28
Col5a1O88207 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm22169-201ENSMUST00000083229 107 ntBASIC0.82□□□□□ -2.28
Col5a1O88207 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Col5a1O88207 Gm15069-201ENSMUST00000117792 192 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms