Protein–RNA interactions for Protein: O55106

Strn, Striatin, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrnO55106 Gm43602-201ENSMUST00000196772 300 ntBASIC1.83□□□□□ -2.12
StrnO55106 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
StrnO55106 Snord80-202ENSMUST00000199023 77 ntBASIC1.83□□□□□ -2.12
StrnO55106 Mir186-201ENSMUST00000083497 71 ntBASIC1.83□□□□□ -2.12
StrnO55106 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.83□□□□□ -2.12
StrnO55106 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.83□□□□□ -2.12
StrnO55106 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
StrnO55106 Gm22482-201ENSMUST00000122563 359 ntBASIC1.82□□□□□ -2.12
StrnO55106 Gm25828-201ENSMUST00000157087 95 ntBASIC1.82□□□□□ -2.12
StrnO55106 Gm25558-201ENSMUST00000158083 106 ntBASIC1.82□□□□□ -2.12
StrnO55106 Gm23967-201ENSMUST00000175062 78 ntBASIC1.82□□□□□ -2.12
StrnO55106 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.82□□□□□ -2.12
StrnO55106 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.82□□□□□ -2.12
StrnO55106 Gm25068-201ENSMUST00000103895 110 ntBASIC1.81□□□□□ -2.12
StrnO55106 Gm23988-201ENSMUST00000117034 122 ntBASIC1.81□□□□□ -2.12
StrnO55106 Gm26181-201ENSMUST00000157687 106 ntBASIC1.81□□□□□ -2.12
StrnO55106 Gm28383-201ENSMUST00000187563 139 ntBASIC1.81□□□□□ -2.12
StrnO55106 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.81□□□□□ -2.12
StrnO55106 Gm22743-201ENSMUST00000083445 133 ntBASIC1.81□□□□□ -2.12
StrnO55106 Gm22228-201ENSMUST00000157364 101 ntBASIC1.8□□□□□ -2.12
StrnO55106 Gm22557-201ENSMUST00000157804 102 ntBASIC1.8□□□□□ -2.12
StrnO55106 Gm22163-201ENSMUST00000158408 135 ntBASIC1.8□□□□□ -2.12
StrnO55106 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.8□□□□□ -2.12
StrnO55106 Gm25035-201ENSMUST00000175414 77 ntBASIC1.8□□□□□ -2.12
StrnO55106 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.8□□□□□ -2.12
StrnO55106 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.8□□□□□ -2.12
StrnO55106 Mir320-201ENSMUST00000083594 82 ntBASIC1.8□□□□□ -2.12
StrnO55106 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
StrnO55106 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.79□□□□□ -2.12
StrnO55106 Gm24683-201ENSMUST00000104840 88 ntBASIC1.79□□□□□ -2.12
StrnO55106 Mir873a-201ENSMUST00000104863 77 ntBASIC1.79□□□□□ -2.12
StrnO55106 Gm13246-201ENSMUST00000120994 315 ntBASIC1.79□□□□□ -2.12
StrnO55106 Gm24222-201ENSMUST00000158834 93 ntBASIC1.79□□□□□ -2.12
StrnO55106 Gm25831-201ENSMUST00000158924 163 ntBASIC1.79□□□□□ -2.12
StrnO55106 Gm42855-201ENSMUST00000197388 253 ntBASIC1.79□□□□□ -2.12
StrnO55106 Gm5002-201ENSMUST00000207145 223 ntBASIC1.79□□□□□ -2.12
StrnO55106 Gm19790-201ENSMUST00000214414 251 ntBASIC1.79□□□□□ -2.12
StrnO55106 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
StrnO55106 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
StrnO55106 Gm15069-201ENSMUST00000117792 192 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm15068-201ENSMUST00000119796 192 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm22911-201ENSMUST00000177920 107 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm27326-201ENSMUST00000183504 95 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm27699-201ENSMUST00000183553 180 ntBASIC1.78□□□□□ -2.12
StrnO55106 Mir8116-201ENSMUST00000184134 97 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm29603-201ENSMUST00000186792 334 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm38364-201ENSMUST00000191814 179 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm44322-201ENSMUST00000196830 115 ntBASIC1.78□□□□□ -2.12
StrnO55106 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.78□□□□□ -2.12
StrnO55106 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.78□□□□□ -2.12
StrnO55106 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.78□□□□□ -2.12
StrnO55106 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
StrnO55106 Mir223-201ENSMUST00000102112 110 ntBASIC1.77□□□□□ -2.13
StrnO55106 Gm22148-201ENSMUST00000104445 107 ntBASIC1.77□□□□□ -2.13
StrnO55106 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.77□□□□□ -2.13
StrnO55106 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.77□□□□□ -2.13
StrnO55106 Gm29613-201ENSMUST00000185846 313 ntBASIC1.77□□□□□ -2.13
StrnO55106 Gm29544-201ENSMUST00000188860 313 ntBASIC1.77□□□□□ -2.13
StrnO55106 Gm28808-201ENSMUST00000190978 313 ntBASIC1.77□□□□□ -2.13
StrnO55106 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
StrnO55106 Gm22477-201ENSMUST00000122569 316 ntBASIC1.76□□□□□ -2.13
StrnO55106 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.76□□□□□ -2.13
StrnO55106 Gm25750-201ENSMUST00000175483 112 ntBASIC1.76□□□□□ -2.13
StrnO55106 Gm16404-201ENSMUST00000177739 468 ntBASIC1.76□□□□□ -2.13
StrnO55106 Gm14598-201ENSMUST00000180109 468 ntBASIC1.76□□□□□ -2.13
StrnO55106 Gm14625-201ENSMUST00000180231 468 ntBASIC1.76□□□□□ -2.13
StrnO55106 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.76□□□□□ -2.13
StrnO55106 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
StrnO55106 Gm24171-201ENSMUST00000104126 131 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm24559-201ENSMUST00000157519 121 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm22888-201ENSMUST00000158640 77 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm28409-201ENSMUST00000187064 103 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm44464-201ENSMUST00000198010 138 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm43911-201ENSMUST00000203097 76 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm44922-201ENSMUST00000206690 90 ntBASIC1.75□□□□□ -2.13
StrnO55106 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.75□□□□□ -2.13
StrnO55106 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.75□□□□□ -2.13
StrnO55106 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
StrnO55106 Snord100-201ENSMUST00000116836 74 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm11856-201ENSMUST00000118712 276 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm14671-201ENSMUST00000121790 262 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm11334-201ENSMUST00000121969 156 ntBASIC1.74□□□□□ -2.13
StrnO55106 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm22850-201ENSMUST00000157714 82 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
StrnO55106 Gm27672-201ENSMUST00000183751 204 ntBASIC1.74□□□□□ -2.13
StrnO55106 Mir6351-201ENSMUST00000183826 99 ntBASIC1.74□□□□□ -2.13
StrnO55106 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm44384-201ENSMUST00000200208 114 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm25855-201ENSMUST00000082787 72 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm24406-201ENSMUST00000083026 128 ntBASIC1.74□□□□□ -2.13
StrnO55106 Gm26074-201ENSMUST00000104063 129 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm25878-201ENSMUST00000104327 93 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm23990-201ENSMUST00000117031 117 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm15115-201ENSMUST00000121145 264 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm23170-201ENSMUST00000157158 106 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm25423-201ENSMUST00000157609 107 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm26415-201ENSMUST00000157673 292 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm25599-201ENSMUST00000157816 103 ntBASIC1.73□□□□□ -2.13
StrnO55106 Gm24131-201ENSMUST00000158539 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms