Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm22842-201ENSMUST00000157709 118 ntBASIC1.55□□□□□ -2.16
Cldn4O35054 Gm22557-201ENSMUST00000157804 102 ntBASIC1.55□□□□□ -2.16
Cldn4O35054 Gm25464-201ENSMUST00000175481 107 ntBASIC1.55□□□□□ -2.16
Cldn4O35054 Mir7665-201ENSMUST00000184907 63 ntBASIC1.55□□□□□ -2.16
Cldn4O35054 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.55□□□□□ -2.16
Cldn4O35054 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Cldn4O35054 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm25884-201ENSMUST00000157782 62 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm23113-201ENSMUST00000158477 99 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm24106-201ENSMUST00000175498 127 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm44325-201ENSMUST00000196757 77 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm44384-201ENSMUST00000200208 114 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm44921-201ENSMUST00000205290 301 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm44922-201ENSMUST00000206690 90 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.54□□□□□ -2.16
Cldn4O35054 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm23100-201ENSMUST00000083455 141 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Gm25627-201ENSMUST00000084003 153 ntBASIC1.54□□□□□ -2.16
Cldn4O35054 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Cldn4O35054 Gm6952-201ENSMUST00000118629 159 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Gm22477-201ENSMUST00000122569 316 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.53□□□□□ -2.16
Cldn4O35054 Gm23122-201ENSMUST00000157645 103 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Gm25035-201ENSMUST00000175414 77 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Mir6350-201ENSMUST00000183639 105 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Mir6419-201ENSMUST00000184784 113 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Cldn4O35054 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Snora3-201ENSMUST00000083082 132 ntBASIC1.53□□□□□ -2.16
Cldn4O35054 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Cldn4O35054 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.53□□□□□ -2.17
Cldn4O35054 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cldn4O35054 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm25323-201ENSMUST00000122555 103 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm23656-201ENSMUST00000122626 112 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.52□□□□□ -2.17
Cldn4O35054 Gm26412-201ENSMUST00000157666 55 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm23898-201ENSMUST00000158111 103 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm25716-201ENSMUST00000158628 104 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Mir3057-201ENSMUST00000175040 91 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm22286-201ENSMUST00000179708 107 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm38364-201ENSMUST00000191814 179 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm43749-201ENSMUST00000199345 352 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.52□□□□□ -2.17
Cldn4O35054 Gm24406-201ENSMUST00000083026 128 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Gm24261-201ENSMUST00000083744 104 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.52□□□□□ -2.17
Cldn4O35054 Mir223-201ENSMUST00000102112 110 ntBASIC1.51□□□□□ -2.17
Cldn4O35054 Gm25828-201ENSMUST00000157087 95 ntBASIC1.51□□□□□ -2.17
Cldn4O35054 Gm26097-201ENSMUST00000179642 93 ntBASIC1.51□□□□□ -2.17
Cldn4O35054 Mir21b-201ENSMUST00000184317 108 ntBASIC1.51□□□□□ -2.17
Cldn4O35054 Gm22850-201ENSMUST00000157714 82 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 Gm22386-201ENSMUST00000158192 129 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 Gm25081-201ENSMUST00000082534 108 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 Mir34a-201ENSMUST00000083559 102 ntBASIC1.5□□□□□ -2.17
Cldn4O35054 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Cldn4O35054 Gm22148-201ENSMUST00000104445 107 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Cldn4O35054 Gm22967-201ENSMUST00000157956 239 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Gm24001-201ENSMUST00000158463 85 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Gm28537-201ENSMUST00000189026 315 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Gm29631-201ENSMUST00000191065 315 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Gm9251-201ENSMUST00000197202 628 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Gm42623-201ENSMUST00000197225 379 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Mir488-201ENSMUST00000093595 109 ntBASIC1.49□□□□□ -2.17
Cldn4O35054 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.49□□□□□ -2.17
Cldn4O35054 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Cldn4O35054 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cldn4O35054 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Cldn4O35054 Gm26049-201ENSMUST00000157313 108 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm22228-201ENSMUST00000157364 101 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm25882-201ENSMUST00000157784 85 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm22606-201ENSMUST00000158290 103 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Mir1966-201ENSMUST00000158807 108 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.48□□□□□ -2.17
Cldn4O35054 Gm27248-201ENSMUST00000184004 166 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm44338-201ENSMUST00000198614 110 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm22743-201ENSMUST00000083445 133 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Mir221-201ENSMUST00000083488 95 ntBASIC1.48□□□□□ -2.17
Cldn4O35054 Gm23578-201ENSMUST00000103943 104 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Mir1298-201ENSMUST00000116681 98 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm13246-201ENSMUST00000120994 315 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm24379-201ENSMUST00000122695 86 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm22082-201ENSMUST00000157587 161 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm26403-201ENSMUST00000158500 105 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm24634-201ENSMUST00000158672 107 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm26360-201ENSMUST00000158872 103 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Mir3098-201ENSMUST00000175416 87 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Gm28669-201ENSMUST00000188400 100 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Cldn4O35054 Gm43911-201ENSMUST00000203097 76 ntBASIC1.47□□□□□ -2.17
Cldn4O35054 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 130.5 ms