Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm22832-201ENSMUST00000178022 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm23863-201ENSMUST00000178265 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm24828-201ENSMUST00000178507 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm23052-201ENSMUST00000178633 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm25729-201ENSMUST00000179050 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm25359-201ENSMUST00000179315 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm22624-201ENSMUST00000179913 108 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Mir6388-201ENSMUST00000184417 75 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm44903-201ENSMUST00000206840 130 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ccdc9bA3KGF9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm23911-201ENSMUST00000104596 134 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm26247-201ENSMUST00000116702 91 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm22486-201ENSMUST00000116815 137 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm23325-201ENSMUST00000157422 129 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm25978-201ENSMUST00000158698 90 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm24345-201ENSMUST00000158706 124 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Mir3094-201ENSMUST00000175121 64 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm26498-201ENSMUST00000177799 79 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm8034-201ENSMUST00000178853 132 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm26230-201ENSMUST00000180141 79 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm27700-201ENSMUST00000185003 81 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Mir6928-201ENSMUST00000185166 70 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
Ccdc9bA3KGF9 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Gm26342-201ENSMUST00000104557 129 ntBASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Gm23181-201ENSMUST00000158685 110 ntBASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Mir6377-201ENSMUST00000183760 114 ntBASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Mir490-201ENSMUST00000093567 84 ntBASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Ccdc9bA3KGF9 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm12309-201ENSMUST00000119889 182 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm25528-201ENSMUST00000180264 132 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm37007-201ENSMUST00000194234 319 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Mir378a-201ENSMUST00000198300 66 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm45429-201ENSMUST00000209527 172 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm22743-201ENSMUST00000083445 133 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Ccdc9bA3KGF9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Mir542-201ENSMUST00000102186 85 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm25280-201ENSMUST00000157269 101 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm22227-201ENSMUST00000157356 259 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm26345-201ENSMUST00000157534 120 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm24922-201ENSMUST00000158511 102 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm23548-201ENSMUST00000158963 106 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm25470-201ENSMUST00000175576 111 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc9bA3KGF9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm23011-201ENSMUST00000104148 132 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm23128-201ENSMUST00000104257 132 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm22999-201ENSMUST00000157082 88 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm24913-201ENSMUST00000157286 107 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm26073-201ENSMUST00000179906 127 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm23128-202ENSMUST00000196578 133 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm7214-201ENSMUST00000222428 272 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm23847-201ENSMUST00000083829 110 ntBASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc9bA3KGF9 Gm11792-201ENSMUST00000120640 168 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm24238-201ENSMUST00000157792 98 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm22888-201ENSMUST00000158640 77 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm25642-201ENSMUST00000175137 66 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm28900-201ENSMUST00000185232 156 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm24698-201ENSMUST00000083883 130 ntBASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ccdc9bA3KGF9 Gm25466-201ENSMUST00000103995 132 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm26076-201ENSMUST00000104065 105 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm25529-201ENSMUST00000104850 92 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm24475-201ENSMUST00000157435 143 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm22651-201ENSMUST00000157872 94 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm24572-201ENSMUST00000175505 88 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm20718-201ENSMUST00000176058 259 ntBASIC2.47□□□□□ -2.01
Ccdc9bA3KGF9 Gm25820-202ENSMUST00000197479 128 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms