Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm43563-201ENSMUST00000196761 198 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 AC153968.2-201ENSMUST00000215579 1140 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 AC154994.1-201ENSMUST00000217395 302 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm26228-201ENSMUST00000082512 107 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm22652-201ENSMUST00000083207 131 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm25518-201ENSMUST00000083864 107 ntBASIC-1.35□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm12105-201ENSMUST00000120846 779 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Mir1899-201ENSMUST00000122798 96 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm23466-201ENSMUST00000157133 106 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24199-201ENSMUST00000157808 136 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm26359-201ENSMUST00000158873 101 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm25693-201ENSMUST00000175443 85 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24897-201ENSMUST00000179033 107 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Mir691-201ENSMUST00000199719 78 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Snord60-201ENSMUST00000082834 78 ntBASIC-1.36□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm23881-201ENSMUST00000116872 66 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm22031-201ENSMUST00000116945 126 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm13518-201ENSMUST00000120018 233 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm12686-201ENSMUST00000120546 397 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm22767-201ENSMUST00000158365 165 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm23725-201ENSMUST00000177876 107 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm27610-201ENSMUST00000184026 74 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 AC125190.3-201ENSMUST00000223224 121 ntBASIC-1.37□□□□□ -2.63
Trav4-3A0A0B4J1K1 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24595-201ENSMUST00000122501 110 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm22085-201ENSMUST00000158344 110 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm25464-201ENSMUST00000175481 107 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm28439-201ENSMUST00000187714 876 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 CT025689.4-201ENSMUST00000225926 601 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24030-201ENSMUST00000083931 164 ntBASIC-1.38□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm44990-201ENSMUST00000203922 217 ntBASIC-1.39□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24276-201ENSMUST00000102181 110 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm23013-201ENSMUST00000104146 106 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24283-201ENSMUST00000104233 107 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24290-201ENSMUST00000157634 96 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm23831-201ENSMUST00000158895 85 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm24306-201ENSMUST00000180229 79 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm25284-201ENSMUST00000180345 141 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Mir145b-201ENSMUST00000184434 75 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm27490-201ENSMUST00000184754 128 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm25081-201ENSMUST00000082534 108 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Gm26066-201ENSMUST00000083385 109 ntBASIC-1.4□□□□□ -2.63
Trav4-3A0A0B4J1K1 Mir743b-201ENSMUST00000104751 77 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23665-201ENSMUST00000158054 62 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm26022-201ENSMUST00000158663 108 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23921-201ENSMUST00000175258 107 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm26501-201ENSMUST00000178307 107 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm9227-201ENSMUST00000194733 566 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 AC154282.1-201ENSMUST00000223154 265 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23404-201ENSMUST00000082543 97 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.41□□□□□ -2.64
Trav4-3A0A0B4J1K1 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm14906-201ENSMUST00000119265 390 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25784-201ENSMUST00000122524 81 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Mir1951-201ENSMUST00000157981 89 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm43114-201ENSMUST00000198298 343 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 AC164297.3-201ENSMUST00000224238 94 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm26203-201ENSMUST00000082911 114 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24164-201ENSMUST00000093663 104 ntBASIC-1.42□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23708-201ENSMUST00000104367 123 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm26007-201ENSMUST00000158798 120 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24418-201ENSMUST00000177597 79 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24639-201ENSMUST00000178518 79 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23076-201ENSMUST00000179082 79 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25077-201ENSMUST00000179157 79 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC-1.43□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25313-201ENSMUST00000101817 116 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25497-201ENSMUST00000104425 132 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23557-201ENSMUST00000157820 138 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24191-201ENSMUST00000157977 122 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24799-201ENSMUST00000178431 79 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23287-201ENSMUST00000179427 116 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23143-201ENSMUST00000180137 116 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm45688-201ENSMUST00000210002 101 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24871-201ENSMUST00000083099 116 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24042-201ENSMUST00000083114 103 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm24445-201ENSMUST00000083981 107 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Rnu5g-201ENSMUST00000093721 116 ntBASIC-1.44□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Scarna9-201ENSMUST00000104318 70 ntBASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm25451-201ENSMUST00000177832 121 ntBASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm44807-201ENSMUST00000206115 154 ntBASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 AC129085.1-201ENSMUST00000225263 165 ntBASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Mir141-201ENSMUST00000083540 72 ntBASIC-1.45□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm23182-201ENSMUST00000158688 135 ntBASIC-1.46□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm9593-201ENSMUST00000166034 469 ntBASIC-1.46□□□□□ -2.64
Trav4-3A0A0B4J1K1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.46□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 183.6 ms