Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm45471-201ENSMUST00000211270 281 ntBASIC0.9□□□□□ -2.27
Trav5-4A0A075B652 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Mir343-201ENSMUST00000102360 75 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm22051-201ENSMUST00000117002 127 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm23655-201ENSMUST00000122627 105 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm26415-201ENSMUST00000157673 292 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm25362-201ENSMUST00000158854 105 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Mir669k-201ENSMUST00000177742 127 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm25673-201ENSMUST00000179957 127 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm42533-201ENSMUST00000196247 157 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm45268-201ENSMUST00000210046 370 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm25636-201ENSMUST00000082666 133 ntBASIC0.89□□□□□ -2.27
Trav5-4A0A075B652 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Gm25878-201ENSMUST00000104327 93 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Snord89-201ENSMUST00000104516 110 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Mir1961-201ENSMUST00000158643 112 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Gm25643-201ENSMUST00000158874 103 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Snora24-201ENSMUST00000174989 130 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Gm25397-201ENSMUST00000176951 92 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Mir6381-201ENSMUST00000183426 87 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Gm27419-201ENSMUST00000184576 109 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Snora20-201ENSMUST00000082703 128 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Gm22809-201ENSMUST00000082743 156 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Mir324-201ENSMUST00000083600 89 ntBASIC0.88□□□□□ -2.27
Trav5-4A0A075B652 Gm24171-201ENSMUST00000104126 131 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 Gm15069-201ENSMUST00000117792 192 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 Gm15068-201ENSMUST00000119796 192 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 Gm27326-201ENSMUST00000183504 95 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 Gm29490-201ENSMUST00000190923 342 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 Mir451a-201ENSMUST00000093557 72 ntBASIC0.87□□□□□ -2.27
Trav5-4A0A075B652 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm25377-201ENSMUST00000104334 129 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm13246-201ENSMUST00000120994 315 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm24594-201ENSMUST00000122502 99 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm22387-201ENSMUST00000158191 131 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm16539-201ENSMUST00000160086 327 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm23267-201ENSMUST00000178490 132 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.86□□□□□ -2.27
Trav5-4A0A075B652 Gm24015-201ENSMUST00000157725 232 ntBASIC0.85□□□□□ -2.27
Trav5-4A0A075B652 Gm25166-201ENSMUST00000158909 111 ntBASIC0.85□□□□□ -2.27
Trav5-4A0A075B652 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.85□□□□□ -2.27
Trav5-4A0A075B652 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.85□□□□□ -2.27
Trav5-4A0A075B652 Gm44948-201ENSMUST00000209050 149 ntBASIC0.85□□□□□ -2.27
Trav5-4A0A075B652 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.85□□□□□ -2.27
Trav5-4A0A075B652 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Gm20630-201ENSMUST00000177387 551 ntBASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Gm25935-201ENSMUST00000178746 107 ntBASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Gm38274-201ENSMUST00000195689 148 ntBASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Gm19572-201ENSMUST00000214326 338 ntBASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Gm46993-201ENSMUST00000220708 259 ntBASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Mir22-201ENSMUST00000083595 95 ntBASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
Trav5-4A0A075B652 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Trav5-4A0A075B652 Gm26090-201ENSMUST00000157897 128 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 Gm23636-201ENSMUST00000175070 95 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 Mir7665-201ENSMUST00000184907 63 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 Snord32a-201ENSMUST00000083285 83 ntBASIC0.83□□□□□ -2.28
Trav5-4A0A075B652 Gm22544-201ENSMUST00000104349 127 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Mir881-201ENSMUST00000104844 78 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Gm24635-201ENSMUST00000122712 128 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Gm22101-201ENSMUST00000157928 103 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Mir7009-201ENSMUST00000184519 64 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Gm43911-201ENSMUST00000203097 76 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Gm22686-201ENSMUST00000082847 100 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Mir33-201ENSMUST00000083531 69 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav5-4A0A075B652 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
Trav5-4A0A075B652 Gm23329-201ENSMUST00000157415 108 ntBASIC0.81□□□□□ -2.28
Trav5-4A0A075B652 Gm26358-201ENSMUST00000158215 97 ntBASIC0.81□□□□□ -2.28
Trav5-4A0A075B652 Gm23967-201ENSMUST00000175062 78 ntBASIC0.81□□□□□ -2.28
Trav5-4A0A075B652 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav5-4A0A075B652 AC154245.1-201ENSMUST00000224615 601 ntBASIC0.81□□□□□ -2.28
Trav5-4A0A075B652 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Mir695-201ENSMUST00000102261 109 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm26293-201ENSMUST00000104170 84 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm12771-201ENSMUST00000120246 135 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm26026-201ENSMUST00000122726 123 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm25720-201ENSMUST00000157503 105 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm24559-201ENSMUST00000157519 121 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm22767-201ENSMUST00000158365 165 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm25768-201ENSMUST00000158570 98 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm24154-201ENSMUST00000175261 130 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm16404-201ENSMUST00000177739 468 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm14598-201ENSMUST00000180109 468 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm14625-201ENSMUST00000180231 468 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm27585-201ENSMUST00000183717 199 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm44301-201ENSMUST00000200362 143 ntBASIC0.8□□□□□ -2.28
Trav5-4A0A075B652 Gm26338-201ENSMUST00000102372 110 ntBASIC0.79□□□□□ -2.28
Trav5-4A0A075B652 Mir669l-201ENSMUST00000103771 98 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms