Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm25381-201ENSMUST00000102078 109 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm15067-201ENSMUST00000119534 156 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm11644-201ENSMUST00000119735 150 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm24747-201ENSMUST00000157835 87 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm23044-201ENSMUST00000157891 100 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm22727-201ENSMUST00000158090 116 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm24668-201ENSMUST00000158935 104 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm27511-201ENSMUST00000183502 127 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm28669-201ENSMUST00000188400 100 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm42719-201ENSMUST00000197393 355 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Mir497-201ENSMUST00000200557 84 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm19855-201ENSMUST00000210145 249 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm25588-201ENSMUST00000082501 140 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm23303-201ENSMUST00000082714 152 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Snord61-201ENSMUST00000083176 71 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Mir201-201ENSMUST00000083470 66 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Mir429-201ENSMUST00000083493 83 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
H2afb3S4R1G7 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
H2afb3S4R1G7 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Gm23898-201ENSMUST00000158111 103 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Gm27934-201ENSMUST00000158795 63 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Gm23567-201ENSMUST00000178005 107 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.8□□□□□ -2.12
H2afb3S4R1G7 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.8□□□□□ -2.12
H2afb3S4R1G7 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
H2afb3S4R1G7 U6.1-201ENSMUST00000157443 101 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Gm20477-201ENSMUST00000174028 280 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Gm21885-201ENSMUST00000178891 327 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Gm27399-201ENSMUST00000184250 78 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Gm44976-201ENSMUST00000205543 261 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Mir34a-201ENSMUST00000083559 102 ntBASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
H2afb3S4R1G7 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm16186-201ENSMUST00000120132 216 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm24717-201ENSMUST00000157522 124 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm24783-201ENSMUST00000157639 100 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm24851-201ENSMUST00000158028 103 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Mir6950-201ENSMUST00000184438 73 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm44358-201ENSMUST00000196301 98 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm22828-201ENSMUST00000083768 107 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm22681-201ENSMUST00000083853 106 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
H2afb3S4R1G7 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
H2afb3S4R1G7 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.77□□□□□ -2.13
H2afb3S4R1G7 Gm23860-201ENSMUST00000179446 132 ntBASIC1.77□□□□□ -2.13
H2afb3S4R1G7 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.77□□□□□ -2.13
H2afb3S4R1G7 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.77□□□□□ -2.13
H2afb3S4R1G7 Gm25797-201ENSMUST00000082640 107 ntBASIC1.77□□□□□ -2.13
H2afb3S4R1G7 Gm24151-201ENSMUST00000082758 141 ntBASIC1.77□□□□□ -2.13
H2afb3S4R1G7 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm25094-201ENSMUST00000103992 131 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm14502-201ENSMUST00000118154 113 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm14937-201ENSMUST00000119709 208 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm14709-201ENSMUST00000121225 304 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm14671-201ENSMUST00000121790 262 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm15692-201ENSMUST00000152173 352 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm27792-201ENSMUST00000184031 115 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm44477-201ENSMUST00000199661 110 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm24165-201ENSMUST00000082718 128 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Snora3-201ENSMUST00000083082 132 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Mir222-201ENSMUST00000083537 79 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm24261-201ENSMUST00000083744 104 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm25409-201ENSMUST00000083764 131 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.76□□□□□ -2.13
H2afb3S4R1G7 Gm24171-201ENSMUST00000104126 131 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm44489-201ENSMUST00000104619 97 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm14626-201ENSMUST00000117619 216 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm11598-201ENSMUST00000119257 357 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm23656-201ENSMUST00000122626 112 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm25771-201ENSMUST00000158565 144 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Mir6388-201ENSMUST00000184417 75 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm43898-201ENSMUST00000204456 424 ntBASIC1.75□□□□□ -2.13
H2afb3S4R1G7 Gm43865-201ENSMUST00000204721 127 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms