Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm25357-201ENSMUST00000082745 72 ntBASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Prpf40aQ9R1C7 Gm24049-201ENSMUST00000102409 100 ntBASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Gm22196-201ENSMUST00000116865 109 ntBASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Gm25539-201ENSMUST00000116886 122 ntBASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Gm25393-201ENSMUST00000157336 285 ntBASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Gm23668-201ENSMUST00000157465 111 ntBASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Gm25373-201ENSMUST00000158156 115 ntBASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Prpf40aQ9R1C7 Mir542-201ENSMUST00000102186 85 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm24443-201ENSMUST00000157242 132 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm22228-201ENSMUST00000157364 101 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm24851-201ENSMUST00000158028 103 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm22212-201ENSMUST00000158096 106 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm25996-201ENSMUST00000175393 117 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Mir8103-201ENSMUST00000183945 107 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm23370-201ENSMUST00000199545 130 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm22283-201ENSMUST00000082556 161 ntBASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Prpf40aQ9R1C7 Gm7209-201ENSMUST00000122339 333 ntBASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 DQ267100-201ENSMUST00000122600 72 ntBASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 Gm23268-201ENSMUST00000175494 78 ntBASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 Mir7242-201ENSMUST00000183710 79 ntBASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 Gm27330-201ENSMUST00000184689 132 ntBASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.01□□□□□ -1.93
Prpf40aQ9R1C7 Gm25544-201ENSMUST00000122676 120 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Gm24333-201ENSMUST00000175101 84 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Mir3094-201ENSMUST00000175121 64 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Snord53-201ENSMUST00000175146 78 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Gm8034-201ENSMUST00000178853 132 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Mir6386-201ENSMUST00000183558 104 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 CT033781.2-201ENSMUST00000221113 153 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Gm44680-201ENSMUST00000208414 2910 ntBASIC3□□□□□ -1.93
Prpf40aQ9R1C7 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm23654-201ENSMUST00000116758 126 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm25945-201ENSMUST00000122484 135 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm24250-201ENSMUST00000157320 135 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm22141-201ENSMUST00000157403 277 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm24000-201ENSMUST00000158063 89 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm22330-201ENSMUST00000158068 115 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm24879-201ENSMUST00000158386 143 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Mir3965-201ENSMUST00000175570 69 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm23770-201ENSMUST00000178009 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm22832-201ENSMUST00000178022 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm23863-201ENSMUST00000178265 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm24828-201ENSMUST00000178507 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm23052-201ENSMUST00000178633 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm25729-201ENSMUST00000179050 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm25359-201ENSMUST00000179315 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm22624-201ENSMUST00000179913 108 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Mir6928-201ENSMUST00000185166 70 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm28282-201ENSMUST00000186072 186 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm22249-201ENSMUST00000082485 136 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Gm26458-201ENSMUST00000082832 128 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.99□□□□□ -1.93
Prpf40aQ9R1C7 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm25500-201ENSMUST00000104426 123 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm24345-201ENSMUST00000158706 124 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm24681-201ENSMUST00000158760 107 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm26498-201ENSMUST00000177799 79 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm26230-201ENSMUST00000180141 79 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Mir6388-201ENSMUST00000184417 75 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm45429-201ENSMUST00000209527 172 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm18346-201ENSMUST00000216782 325 ntBASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Prpf40aQ9R1C7 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm26473-201ENSMUST00000116763 127 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm25280-201ENSMUST00000157269 101 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm25978-201ENSMUST00000158698 90 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Mir6377-201ENSMUST00000183760 114 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm19257-201ENSMUST00000186121 183 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm44393-201ENSMUST00000197418 138 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm34314-201ENSMUST00000203622 367 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm44903-201ENSMUST00000206840 130 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.97□□□□□ -1.93
Prpf40aQ9R1C7 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
Prpf40aQ9R1C7 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms