Protein–RNA interactions for Protein: Q9JKU8

Lmx1a, LIM homeobox transcription factor 1-alpha, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1aQ9JKU8 Gm22515-201ENSMUST00000158273 305 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm23114-201ENSMUST00000158478 117 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm20386-201ENSMUST00000174010 132 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm29665-201ENSMUST00000191457 528 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm44301-201ENSMUST00000200362 143 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm25851-201ENSMUST00000082794 107 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm24523-201ENSMUST00000083965 132 ntBASIC0.65□□□□□ -2.31
Lmx1aQ9JKU8 Gm14536-201ENSMUST00000118324 138 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm15027-201ENSMUST00000120922 138 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm22482-201ENSMUST00000122563 359 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm23982-201ENSMUST00000157141 106 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm23640-201ENSMUST00000157860 104 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm25375-201ENSMUST00000158157 135 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm23024-201ENSMUST00000158770 292 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm43898-201ENSMUST00000204456 424 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm44921-201ENSMUST00000205290 301 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 Gm25650-201ENSMUST00000083784 162 ntBASIC0.64□□□□□ -2.31
Lmx1aQ9JKU8 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Gm22544-201ENSMUST00000104349 127 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Gm23536-201ENSMUST00000157541 134 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Gm23101-201ENSMUST00000157550 137 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Gm37404-201ENSMUST00000195726 359 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.63□□□□□ -2.31
Lmx1aQ9JKU8 Gm24271-201ENSMUST00000102327 111 ntBASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm26421-201ENSMUST00000104279 132 ntBASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm13711-201ENSMUST00000119708 453 ntBASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm22802-201ENSMUST00000175621 89 ntBASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm27607-201ENSMUST00000185162 122 ntBASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm28418-201ENSMUST00000186179 423 ntBASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Lmx1aQ9JKU8 Mir654-201ENSMUST00000104787 84 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm13725-201ENSMUST00000122139 207 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm22984-201ENSMUST00000122751 122 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm24501-201ENSMUST00000158452 62 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm23194-201ENSMUST00000158813 105 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm26159-201ENSMUST00000158968 104 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm25615-201ENSMUST00000177836 94 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm22448-201ENSMUST00000179254 107 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm27545-201ENSMUST00000184755 202 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm38060-201ENSMUST00000194822 464 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm44396-201ENSMUST00000199843 114 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm18213-201ENSMUST00000207850 178 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Gm8219-201ENSMUST00000218309 242 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Mir34a-201ENSMUST00000083559 102 ntBASIC0.61□□□□□ -2.31
Lmx1aQ9JKU8 Mir759-201ENSMUST00000103254 98 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm24375-201ENSMUST00000104397 132 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Mir880-201ENSMUST00000104809 78 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm14568-201ENSMUST00000119321 294 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm6985-201ENSMUST00000121255 271 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm25011-201ENSMUST00000158398 126 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm16546-201ENSMUST00000159442 355 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm20391-201ENSMUST00000174722 106 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm26236-201ENSMUST00000175536 137 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm27365-201ENSMUST00000184041 177 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm29512-201ENSMUST00000185544 315 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Gm44858-201ENSMUST00000207360 154 ntBASIC0.6□□□□□ -2.31
Lmx1aQ9JKU8 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 Gm22321-201ENSMUST00000157152 104 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 Gm23113-201ENSMUST00000158477 99 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 Gm20923-201ENSMUST00000190009 319 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 Gm21088-201ENSMUST00000190875 316 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 Gm44468-201ENSMUST00000199516 105 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.59□□□□□ -2.31
Lmx1aQ9JKU8 Gm25544-201ENSMUST00000122676 120 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm22491-201ENSMUST00000157190 102 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm27723-201ENSMUST00000157398 63 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm22163-201ENSMUST00000158408 135 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm25949-201ENSMUST00000175333 114 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm26968-201ENSMUST00000182894 481 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm38113-201ENSMUST00000193704 201 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm44326-201ENSMUST00000198226 101 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm45616-201ENSMUST00000211711 319 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm25855-201ENSMUST00000082787 72 ntBASIC0.58□□□□□ -2.32
Lmx1aQ9JKU8 Gm26479-201ENSMUST00000122620 106 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Gm27845-201ENSMUST00000184479 114 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Gm43563-201ENSMUST00000196761 198 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Gm43505-201ENSMUST00000200579 139 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Snora19-201ENSMUST00000082962 132 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Gm23658-201ENSMUST00000083233 132 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Mir33-201ENSMUST00000083531 69 ntBASIC0.57□□□□□ -2.32
Lmx1aQ9JKU8 Gm14919-201ENSMUST00000120839 390 ntBASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 Mir6389-201ENSMUST00000183661 102 ntBASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 Gm24311-201ENSMUST00000082570 104 ntBASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 Gm24765-201ENSMUST00000083691 103 ntBASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Lmx1aQ9JKU8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms