Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Scn5aQ9JJV9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.15□□□□□ -2.22
Scn5aQ9JJV9 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.15□□□□□ -2.22
Scn5aQ9JJV9 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.15□□□□□ -2.22
Scn5aQ9JJV9 Rny1-201ENSMUST00000083767 112 ntBASIC1.15□□□□□ -2.22
Scn5aQ9JJV9 Mir466p-201ENSMUST00000103925 89 ntBASIC1.15□□□□□ -2.23
Scn5aQ9JJV9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.15□□□□□ -2.23
Scn5aQ9JJV9 Gm28724-201ENSMUST00000186149 625 ntBASIC1.15□□□□□ -2.23
Scn5aQ9JJV9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 Gm22586-201ENSMUST00000157507 122 ntBASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 Gm37089-201ENSMUST00000195616 129 ntBASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 Gm22884-201ENSMUST00000083127 140 ntBASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 Mir155-201ENSMUST00000083463 65 ntBASIC1.14□□□□□ -2.23
Scn5aQ9JJV9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm26339-201ENSMUST00000102368 99 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Mir6336-201ENSMUST00000183581 130 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm44563-201ENSMUST00000207958 178 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Snord19-201ENSMUST00000104609 76 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm23656-201ENSMUST00000122626 112 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm24668-201ENSMUST00000158935 104 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Snora24-201ENSMUST00000174989 130 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm6105-201ENSMUST00000200580 624 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm23423-201ENSMUST00000082782 106 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Gm24261-201ENSMUST00000083744 104 ntBASIC1.13□□□□□ -2.23
Scn5aQ9JJV9 Mir544-201ENSMUST00000103813 78 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm6897-201ENSMUST00000117714 138 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm14758-201ENSMUST00000119104 138 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm25783-201ENSMUST00000122525 190 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm23390-201ENSMUST00000157393 106 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm26426-201ENSMUST00000177866 123 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm26060-201ENSMUST00000180094 123 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm27585-201ENSMUST00000183717 199 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Mir219b-201ENSMUST00000198317 65 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm23370-201ENSMUST00000199545 130 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm24204-201ENSMUST00000082950 107 ntBASIC1.12□□□□□ -2.23
Scn5aQ9JJV9 Gm24942-201ENSMUST00000158328 114 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm24006-201ENSMUST00000158462 132 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm24229-201ENSMUST00000158830 118 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm25024-201ENSMUST00000179667 104 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm43563-201ENSMUST00000196761 198 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm25634-201ENSMUST00000082667 105 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Mir22-201ENSMUST00000083595 95 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm22784-201ENSMUST00000104088 132 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm25878-201ENSMUST00000104327 93 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm24835-201ENSMUST00000116777 111 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm14922-201ENSMUST00000121131 163 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm28020-201ENSMUST00000157739 67 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm25267-201ENSMUST00000158522 63 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Mir1931-201ENSMUST00000158589 119 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.11□□□□□ -2.23
Scn5aQ9JJV9 Gm24588-201ENSMUST00000116696 83 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm11856-201ENSMUST00000118712 276 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm25825-201ENSMUST00000157091 124 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm23277-201ENSMUST00000157914 136 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm25491-201ENSMUST00000158733 308 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm44052-201ENSMUST00000203382 396 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm22686-201ENSMUST00000082847 100 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm6025-201ENSMUST00000121517 201 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm24595-201ENSMUST00000122501 110 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm23542-201ENSMUST00000158208 96 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm38183-201ENSMUST00000193189 205 ntBASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.1□□□□□ -2.23
Scn5aQ9JJV9 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Scn5aQ9JJV9 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.09□□□□□ -2.23
Scn5aQ9JJV9 Mir541-201ENSMUST00000102097 90 ntBASIC1.09□□□□□ -2.24
Scn5aQ9JJV9 Gm16032-201ENSMUST00000118534 168 ntBASIC1.09□□□□□ -2.24
Scn5aQ9JJV9 Gm24559-201ENSMUST00000157519 121 ntBASIC1.09□□□□□ -2.24
Scn5aQ9JJV9 Gm23141-201ENSMUST00000178682 94 ntBASIC1.09□□□□□ -2.24
Scn5aQ9JJV9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.09□□□□□ -2.24
Scn5aQ9JJV9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.09□□□□□ -2.24
Scn5aQ9JJV9 n-R5s87-201ENSMUST00000122752 116 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm23665-201ENSMUST00000158054 62 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm25166-201ENSMUST00000158909 111 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Mir669k-201ENSMUST00000177742 127 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm25673-201ENSMUST00000179957 127 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm45002-201ENSMUST00000208045 120 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm25204-201ENSMUST00000082843 106 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Snord1a-201ENSMUST00000083160 74 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Mir653-201ENSMUST00000102402 85 ntBASIC1.08□□□□□ -2.24
Scn5aQ9JJV9 Gm24867-201ENSMUST00000104161 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 217 ms