Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Upf1Q9EPU0 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Mir669b-201ENSMUST00000102172 97 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm24280-201ENSMUST00000104237 134 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Snord90-201ENSMUST00000104568 111 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm26473-201ENSMUST00000116763 127 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm13246-201ENSMUST00000120994 315 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm24668-201ENSMUST00000158935 104 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm16111-201ENSMUST00000162128 285 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Mir6350-201ENSMUST00000183639 105 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm29603-201ENSMUST00000186792 334 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm43381-201ENSMUST00000198553 165 ntBASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Upf1Q9EPU0 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm25980-201ENSMUST00000157176 218 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm24851-201ENSMUST00000158028 103 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm37545-201ENSMUST00000186512 148 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm3724-201ENSMUST00000197957 349 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm19855-201ENSMUST00000210145 249 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm45791-201ENSMUST00000212908 352 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm25788-201ENSMUST00000082721 131 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm25136-201ENSMUST00000083253 115 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm22738-201ENSMUST00000083440 147 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Mir300-201ENSMUST00000083485 79 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm25627-201ENSMUST00000084003 153 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.66□□□□□ -1.98
Upf1Q9EPU0 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.66□□□□□ -1.98
Upf1Q9EPU0 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Upf1Q9EPU0 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.65□□□□□ -1.98
Upf1Q9EPU0 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Upf1Q9EPU0 Snord53-201ENSMUST00000175146 78 ntBASIC2.65□□□□□ -1.99
Upf1Q9EPU0 Gm44976-201ENSMUST00000205543 261 ntBASIC2.65□□□□□ -1.99
Upf1Q9EPU0 Gm23947-201ENSMUST00000093636 107 ntBASIC2.65□□□□□ -1.99
Upf1Q9EPU0 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.65□□□□□ -1.99
Upf1Q9EPU0 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm26339-201ENSMUST00000102368 99 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm25170-201ENSMUST00000104191 129 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm14567-201ENSMUST00000117155 174 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm7209-201ENSMUST00000122339 333 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm26277-201ENSMUST00000157097 152 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.64□□□□□ -1.99
Upf1Q9EPU0 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm15069-201ENSMUST00000117792 192 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm15068-201ENSMUST00000119796 192 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm24141-201ENSMUST00000122776 115 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm24634-201ENSMUST00000158672 107 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm26864-201ENSMUST00000181346 156 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Mir8103-201ENSMUST00000183945 107 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm28669-201ENSMUST00000188400 100 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm42719-201ENSMUST00000197393 355 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm25357-201ENSMUST00000082745 72 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Snord61-201ENSMUST00000083176 71 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Mir201-201ENSMUST00000083470 66 ntBASIC2.63□□□□□ -1.99
Upf1Q9EPU0 Gm23898-201ENSMUST00000158111 103 ntBASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Gm27326-201ENSMUST00000183504 95 ntBASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Gm43911-201ENSMUST00000203097 76 ntBASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Gm25814-201ENSMUST00000082754 107 ntBASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Mir93-201ENSMUST00000083593 88 ntBASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Gm10172-201ENSMUST00000085929 558 ntBASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Upf1Q9EPU0 Gm22349-201ENSMUST00000157864 107 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Gm27894-201ENSMUST00000184177 92 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Gm29613-201ENSMUST00000185846 313 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Gm29544-201ENSMUST00000188860 313 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Gm28808-201ENSMUST00000190978 313 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Mir34a-201ENSMUST00000083559 102 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Mir489-201ENSMUST00000093599 107 ntBASIC2.61□□□□□ -1.99
Upf1Q9EPU0 Gm24342-201ENSMUST00000103907 104 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Gm25090-201ENSMUST00000104000 132 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Gm26082-201ENSMUST00000104070 127 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Mir3968-201ENSMUST00000175355 100 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Gm44464-201ENSMUST00000198010 138 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.6□□□□□ -1.99
Upf1Q9EPU0 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm24098-201ENSMUST00000102075 109 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm25381-201ENSMUST00000102078 109 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm26080-201ENSMUST00000104069 131 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm26049-201ENSMUST00000157313 108 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm25910-201ENSMUST00000157620 140 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm25884-201ENSMUST00000157782 62 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm23409-201ENSMUST00000158516 237 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Mir3086-201ENSMUST00000175072 87 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm25470-201ENSMUST00000175576 111 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Mir6352-201ENSMUST00000184495 116 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Gm28794-201ENSMUST00000185276 136 ntBASIC2.59□□□□□ -1.99
Upf1Q9EPU0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms