Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm27722-201ENSMUST00000183908 76 ntBASIC1.75□□□□□ -2.13
Usp11Q99K46 Gm42719-201ENSMUST00000197393 355 ntBASIC1.75□□□□□ -2.13
Usp11Q99K46 Gm25820-201ENSMUST00000198589 127 ntBASIC1.75□□□□□ -2.13
Usp11Q99K46 Snord80-202ENSMUST00000199023 77 ntBASIC1.75□□□□□ -2.13
Usp11Q99K46 Gm5002-201ENSMUST00000207145 223 ntBASIC1.75□□□□□ -2.13
Usp11Q99K46 Gm45754-201ENSMUST00000212380 279 ntBASIC1.75□□□□□ -2.13
Usp11Q99K46 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.74□□□□□ -2.13
Usp11Q99K46 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Usp11Q99K46 Gm25279-201ENSMUST00000122608 133 ntBASIC1.74□□□□□ -2.13
Usp11Q99K46 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.74□□□□□ -2.13
Usp11Q99K46 Gm22556-201ENSMUST00000157803 100 ntBASIC1.74□□□□□ -2.13
Usp11Q99K46 Gm25658-201ENSMUST00000158472 128 ntBASIC1.74□□□□□ -2.13
Usp11Q99K46 Snord87-201ENSMUST00000175437 87 ntBASIC1.74□□□□□ -2.13
Usp11Q99K46 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Usp11Q99K46 Gm44057-201ENSMUST00000204547 96 ntBASIC1.74□□□□□ -2.13
Usp11Q99K46 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Usp11Q99K46 Gm6952-201ENSMUST00000118629 159 ntBASIC1.73□□□□□ -2.13
Usp11Q99K46 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.73□□□□□ -2.13
Usp11Q99K46 Gm24634-201ENSMUST00000158672 107 ntBASIC1.73□□□□□ -2.13
Usp11Q99K46 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.73□□□□□ -2.13
Usp11Q99K46 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.73□□□□□ -2.13
Usp11Q99K46 Gm24261-201ENSMUST00000083744 104 ntBASIC1.73□□□□□ -2.13
Usp11Q99K46 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.73□□□□□ -2.13
Usp11Q99K46 Gm25627-201ENSMUST00000084003 153 ntBASIC1.73□□□□□ -2.13
Usp11Q99K46 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Gm22476-201ENSMUST00000158902 100 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Gm27928-201ENSMUST00000183747 256 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Gm44308-201ENSMUST00000197080 99 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Mir3087-201ENSMUST00000199405 56 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.72□□□□□ -2.13
Usp11Q99K46 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.72□□□□□ -2.13
Usp11Q99K46 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Usp11Q99K46 Gm24638-201ENSMUST00000179807 132 ntBASIC1.71□□□□□ -2.14
Usp11Q99K46 Mir6350-201ENSMUST00000183639 105 ntBASIC1.71□□□□□ -2.14
Usp11Q99K46 Mir6419-201ENSMUST00000184784 113 ntBASIC1.71□□□□□ -2.14
Usp11Q99K46 Gm44325-201ENSMUST00000196757 77 ntBASIC1.71□□□□□ -2.14
Usp11Q99K46 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.71□□□□□ -2.14
Usp11Q99K46 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.71□□□□□ -2.14
Usp11Q99K46 Gm24406-201ENSMUST00000083026 128 ntBASIC1.71□□□□□ -2.14
Usp11Q99K46 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Usp11Q99K46 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Usp11Q99K46 Gm26160-201ENSMUST00000158965 63 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Mir7683-201ENSMUST00000183842 61 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Gm28537-201ENSMUST00000189026 315 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Gm29631-201ENSMUST00000191065 315 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Gm24151-201ENSMUST00000082758 141 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Mir34a-201ENSMUST00000083559 102 ntBASIC1.7□□□□□ -2.14
Usp11Q99K46 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Usp11Q99K46 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm22761-201ENSMUST00000102278 96 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Mir301b-201ENSMUST00000102333 97 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm23898-201ENSMUST00000158111 103 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm5900-201ENSMUST00000179862 375 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Mir6351-201ENSMUST00000183826 99 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm44921-201ENSMUST00000205290 301 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm19790-201ENSMUST00000214414 251 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Gm25697-201ENSMUST00000082902 98 ntBASIC1.69□□□□□ -2.14
Usp11Q99K46 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Usp11Q99K46 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 U6.1-201ENSMUST00000157443 101 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 Gm22557-201ENSMUST00000157804 102 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 Gm22665-201ENSMUST00000158720 275 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 Gm16404-201ENSMUST00000177739 468 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Usp11Q99K46 Gm14598-201ENSMUST00000180109 468 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 Gm14625-201ENSMUST00000180231 468 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.68□□□□□ -2.14
Usp11Q99K46 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.68□□□□□ -2.14
Usp11Q99K46 Gm22148-201ENSMUST00000104445 107 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm23990-201ENSMUST00000117031 117 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm25323-201ENSMUST00000122555 103 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm25599-201ENSMUST00000157816 103 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Mir3057-201ENSMUST00000175040 91 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm24106-201ENSMUST00000175498 127 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm27511-201ENSMUST00000183502 127 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm28383-201ENSMUST00000187563 139 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm9251-201ENSMUST00000197202 628 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Mir186-201ENSMUST00000083497 71 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Mir148b-201ENSMUST00000083626 97 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.67□□□□□ -2.14
Usp11Q99K46 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Usp11Q99K46 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm23172-201ENSMUST00000157160 124 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm26181-201ENSMUST00000157687 106 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm24076-201ENSMUST00000158179 94 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm44922-201ENSMUST00000206690 90 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm22306-201ENSMUST00000082692 107 ntBASIC1.66□□□□□ -2.14
Usp11Q99K46 Gm22704-201ENSMUST00000083027 137 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 187.7 ms