Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm25982-201ENSMUST00000157920 101 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm16546-201ENSMUST00000159442 355 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm27317-201ENSMUST00000183533 95 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm28330-201ENSMUST00000190353 171 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Mir219b-201ENSMUST00000198317 65 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.38□□□□□ -2.35
Chrna3Q8R4G9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Gm25496-201ENSMUST00000104430 120 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Gm24192-201ENSMUST00000157978 145 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Gm28927-201ENSMUST00000191528 272 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Gm45508-201ENSMUST00000209298 299 ntBASIC0.37□□□□□ -2.35
Chrna3Q8R4G9 Gm23536-201ENSMUST00000157541 134 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm23665-201ENSMUST00000158054 62 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm23262-201ENSMUST00000158323 168 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm23793-201ENSMUST00000179396 117 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Mir7093-201ENSMUST00000184195 101 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm44462-201ENSMUST00000199696 129 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm22283-201ENSMUST00000082556 161 ntBASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
Chrna3Q8R4G9 Gm23060-201ENSMUST00000102345 109 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm26474-201ENSMUST00000116762 122 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm14298-201ENSMUST00000139032 237 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm16356-201ENSMUST00000143300 169 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm24909-201ENSMUST00000157290 280 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm23101-201ENSMUST00000157550 137 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm23584-201ENSMUST00000157655 129 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm24000-201ENSMUST00000158063 89 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm24880-201ENSMUST00000158776 85 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm44488-201ENSMUST00000199467 119 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm44052-201ENSMUST00000203382 396 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 AC159619.2-201ENSMUST00000222924 401 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm26326-201ENSMUST00000083070 129 ntBASIC0.35□□□□□ -2.35
Chrna3Q8R4G9 Gm22786-201ENSMUST00000104086 122 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm12647-201ENSMUST00000118977 265 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm23024-201ENSMUST00000158770 292 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm43624-201ENSMUST00000197368 180 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm29818-201ENSMUST00000218070 165 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm24616-201ENSMUST00000083274 139 ntBASIC0.34□□□□□ -2.36
Chrna3Q8R4G9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Snord89-201ENSMUST00000104516 110 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm25773-201ENSMUST00000116718 127 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm23779-201ENSMUST00000157938 64 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm16539-201ENSMUST00000160086 327 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm26116-201ENSMUST00000175600 77 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm23404-201ENSMUST00000082543 97 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm26111-201ENSMUST00000083969 106 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Mir500-201ENSMUST00000093600 92 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Gm22365-201ENSMUST00000093750 117 ntBASIC0.33□□□□□ -2.36
Chrna3Q8R4G9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm14307-201ENSMUST00000118930 291 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm11835-201ENSMUST00000120635 663 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm14297-201ENSMUST00000129110 291 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm16362-201ENSMUST00000135189 214 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm24015-201ENSMUST00000157725 232 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm24345-201ENSMUST00000158706 124 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm26073-201ENSMUST00000179906 127 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Mir465d-201ENSMUST00000196314 58 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm30155-201ENSMUST00000223458 339 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm26495-201ENSMUST00000083152 137 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm25937-201ENSMUST00000083912 107 ntBASIC0.32□□□□□ -2.36
Chrna3Q8R4G9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 Gm25558-201ENSMUST00000158083 106 ntBASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 Gm23853-201ENSMUST00000158375 104 ntBASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 Gm43563-201ENSMUST00000196761 198 ntBASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 Gm44419-201ENSMUST00000203338 229 ntBASIC0.31□□□□□ -2.36
Chrna3Q8R4G9 Gm22814-201ENSMUST00000157452 104 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 Gm22085-201ENSMUST00000158344 110 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 Gm25044-201ENSMUST00000158603 104 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 Gm24527-201ENSMUST00000082920 107 ntBASIC0.3□□□□□ -2.36
Chrna3Q8R4G9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Chrna3Q8R4G9 Gm22469-201ENSMUST00000104118 133 ntBASIC0.29□□□□□ -2.36
Chrna3Q8R4G9 Gm26152-201ENSMUST00000157427 101 ntBASIC0.29□□□□□ -2.36
Chrna3Q8R4G9 Gm22983-201ENSMUST00000158308 104 ntBASIC0.29□□□□□ -2.36
Chrna3Q8R4G9 Gm45471-201ENSMUST00000211270 281 ntBASIC0.29□□□□□ -2.36
Chrna3Q8R4G9 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.29□□□□□ -2.36
Chrna3Q8R4G9 Gm23412-201ENSMUST00000083017 107 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms