Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm44470-201ENSMUST00000203913 142 ntBASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Mir151-201ENSMUST00000083678 68 ntBASIC2.33□□□□□ -2.04
Ushbp1Q8R370 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Gm22477-201ENSMUST00000122569 316 ntBASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Gm25069-201ENSMUST00000175238 86 ntBASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Gm21885-201ENSMUST00000178891 327 ntBASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Trav5-2-201ENSMUST00000199855 280 ntBASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Gm23239-201ENSMUST00000083006 181 ntBASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Mir186-201ENSMUST00000083497 71 ntBASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Ushbp1Q8R370 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Gm23320-201ENSMUST00000104462 127 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Gm15281-201ENSMUST00000125181 351 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Gm22850-201ENSMUST00000157714 82 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Gm25460-201ENSMUST00000157954 127 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Mir669n-201ENSMUST00000158636 54 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Mir7016-201ENSMUST00000184308 72 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Gm44338-201ENSMUST00000198614 110 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Mir301-201ENSMUST00000083655 86 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ushbp1Q8R370 Mir758-201ENSMUST00000103260 81 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm22373-201ENSMUST00000104584 89 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm23109-201ENSMUST00000116867 126 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Mir1949-201ENSMUST00000157434 141 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm22556-201ENSMUST00000157803 100 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm26337-201ENSMUST00000178000 79 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Mir7039-201ENSMUST00000183852 85 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm27722-201ENSMUST00000183908 76 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm27979-201ENSMUST00000185126 56 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm29604-201ENSMUST00000187176 163 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm18502-201ENSMUST00000218679 199 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm25136-201ENSMUST00000083253 115 ntBASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ushbp1Q8R370 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm22967-201ENSMUST00000157956 239 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm26004-201ENSMUST00000158804 116 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm25994-201ENSMUST00000175392 101 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm23922-201ENSMUST00000178792 79 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm24657-201ENSMUST00000180085 79 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm22996-201ENSMUST00000180236 79 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Mir6388-201ENSMUST00000184417 75 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm44490-201ENSMUST00000198566 127 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Gm22297-201ENSMUST00000083312 106 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Ushbp1Q8R370 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm24375-201ENSMUST00000104397 132 ntBASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm23342-201ENSMUST00000158958 115 ntBASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm23722-201ENSMUST00000083002 130 ntBASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.28□□□□□ -2.04
Ushbp1Q8R370 Gm26360-201ENSMUST00000158872 103 ntBASIC2.27□□□□□ -2.05
Ushbp1Q8R370 Mir6350-201ENSMUST00000183639 105 ntBASIC2.27□□□□□ -2.05
Ushbp1Q8R370 Gm28409-201ENSMUST00000187064 103 ntBASIC2.27□□□□□ -2.05
Ushbp1Q8R370 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.27□□□□□ -2.05
Ushbp1Q8R370 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.27□□□□□ -2.05
Ushbp1Q8R370 Gm25814-201ENSMUST00000082754 107 ntBASIC2.27□□□□□ -2.05
Ushbp1Q8R370 Mir107-201ENSMUST00000083660 87 ntBASIC2.27□□□□□ -2.05
Ushbp1Q8R370 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm25068-201ENSMUST00000103895 110 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm24394-201ENSMUST00000158141 123 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm20477-201ENSMUST00000174028 280 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm38364-201ENSMUST00000191814 179 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm37116-201ENSMUST00000195161 147 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm44057-201ENSMUST00000204547 96 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 CT485607.2-201ENSMUST00000214650 91 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Gm10813-201ENSMUST00000099936 90 ntBASIC2.26□□□□□ -2.05
Ushbp1Q8R370 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm24076-201ENSMUST00000158179 94 ntBASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm23113-201ENSMUST00000158477 99 ntBASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm29603-201ENSMUST00000186792 334 ntBASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm25812-201ENSMUST00000082751 103 ntBASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm24412-201ENSMUST00000083426 109 ntBASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm23947-201ENSMUST00000093636 107 ntBASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Ushbp1Q8R370 Gm24098-201ENSMUST00000102075 109 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm25381-201ENSMUST00000102078 109 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm23772-201ENSMUST00000104433 102 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm25323-201ENSMUST00000122555 103 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm22727-201ENSMUST00000158090 116 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm23337-201ENSMUST00000158959 118 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Gm44921-201ENSMUST00000205290 301 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.24□□□□□ -2.05
Ushbp1Q8R370 Mir669b-201ENSMUST00000102172 97 ntBASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Gm22612-201ENSMUST00000158293 101 ntBASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Gm23267-201ENSMUST00000178490 132 ntBASIC2.23□□□□□ -2.05
Ushbp1Q8R370 Gm43865-201ENSMUST00000204721 127 ntBASIC2.23□□□□□ -2.05
Ushbp1Q8R370 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 186.3 ms