Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir6350-201ENSMUST00000183639 105 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Mir7225-201ENSMUST00000184178 54 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Gm25820-201ENSMUST00000198589 127 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Gm44938-201ENSMUST00000208614 427 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Gm22683-201ENSMUST00000082854 137 ntBASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
Ubfd1Q78JW9 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm25938-201ENSMUST00000104139 166 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm25377-201ENSMUST00000104334 129 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm22545-201ENSMUST00000104350 132 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Mir1931-201ENSMUST00000158589 119 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm26004-201ENSMUST00000158804 116 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Mir6481-201ENSMUST00000184617 110 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm9251-201ENSMUST00000197202 628 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm44921-201ENSMUST00000205290 301 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm22973-201ENSMUST00000083298 191 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Mir490-201ENSMUST00000093567 84 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Ubfd1Q78JW9 Gm25090-201ENSMUST00000104000 132 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 Gm6952-201ENSMUST00000118629 159 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 Gm25985-201ENSMUST00000122677 107 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 Mir7679-201ENSMUST00000183379 63 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 Gm27517-201ENSMUST00000184347 236 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 Mir410-201ENSMUST00000083563 81 ntBASIC1.78□□□□□ -2.12
Ubfd1Q78JW9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm24750-201ENSMUST00000157843 104 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm25035-201ENSMUST00000175414 77 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm27898-201ENSMUST00000183987 80 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Mir6950-201ENSMUST00000184438 73 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm29613-201ENSMUST00000185846 313 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm29544-201ENSMUST00000188860 313 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm28808-201ENSMUST00000190978 313 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Gm43602-201ENSMUST00000196772 300 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.77□□□□□ -2.13
Ubfd1Q78JW9 Mir223-201ENSMUST00000102112 110 ntBASIC1.76□□□□□ -2.13
Ubfd1Q78JW9 Gm25323-201ENSMUST00000122555 103 ntBASIC1.76□□□□□ -2.13
Ubfd1Q78JW9 Gm26160-201ENSMUST00000158965 63 ntBASIC1.76□□□□□ -2.13
Ubfd1Q78JW9 Mir6995-201ENSMUST00000183658 71 ntBASIC1.76□□□□□ -2.13
Ubfd1Q78JW9 Gm22306-201ENSMUST00000082692 107 ntBASIC1.76□□□□□ -2.13
Ubfd1Q78JW9 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.76□□□□□ -2.13
Ubfd1Q78JW9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 Gm15067-201ENSMUST00000119534 156 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 Gm25558-201ENSMUST00000158083 106 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 Gm28669-201ENSMUST00000188400 100 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 Snord80-202ENSMUST00000199023 77 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 Gm24151-201ENSMUST00000082758 141 ntBASIC1.75□□□□□ -2.13
Ubfd1Q78JW9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Ubfd1Q78JW9 Gm22228-201ENSMUST00000157364 101 ntBASIC1.74□□□□□ -2.13
Ubfd1Q78JW9 Gm22989-201ENSMUST00000158313 86 ntBASIC1.74□□□□□ -2.13
Ubfd1Q78JW9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Ubfd1Q78JW9 Gm37997-201ENSMUST00000193515 267 ntBASIC1.74□□□□□ -2.13
Ubfd1Q78JW9 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.74□□□□□ -2.13
Ubfd1Q78JW9 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm15069-201ENSMUST00000117792 192 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm15068-201ENSMUST00000119796 192 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm24783-201ENSMUST00000157639 100 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm22163-201ENSMUST00000158408 135 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm22476-201ENSMUST00000158902 100 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm27511-201ENSMUST00000183502 127 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm22743-201ENSMUST00000083445 133 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Mir186-201ENSMUST00000083497 71 ntBASIC1.73□□□□□ -2.13
Ubfd1Q78JW9 Gm13246-201ENSMUST00000120994 315 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 U6.1-201ENSMUST00000157443 101 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Gm22556-201ENSMUST00000157803 100 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Gm28409-201ENSMUST00000187064 103 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Gm38364-201ENSMUST00000191814 179 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Ubfd1Q78JW9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm23766-201ENSMUST00000103894 80 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm25828-201ENSMUST00000157087 95 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm22337-201ENSMUST00000157721 132 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm23209-201ENSMUST00000158667 110 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm24572-201ENSMUST00000175505 88 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm24656-201ENSMUST00000177548 132 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm27544-201ENSMUST00000185069 155 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm19790-201ENSMUST00000214414 251 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.71□□□□□ -2.14
Ubfd1Q78JW9 Gm24171-201ENSMUST00000104126 131 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Gm22482-201ENSMUST00000122563 359 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Gm22551-201ENSMUST00000157795 103 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Gm22557-201ENSMUST00000157804 102 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Gm24229-201ENSMUST00000158830 118 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Gm25750-201ENSMUST00000175483 112 ntBASIC1.7□□□□□ -2.14
Ubfd1Q78JW9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms