Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Mir155-201ENSMUST00000083463 65 ntBASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm22658-201ENSMUST00000104196 155 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm24375-201ENSMUST00000104397 132 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm14602-201ENSMUST00000118625 340 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm24475-201ENSMUST00000157435 143 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Mir8090-201ENSMUST00000185078 136 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm22055-201ENSMUST00000083388 107 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Mir489-201ENSMUST00000093599 107 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm24877-201ENSMUST00000158779 116 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm23567-201ENSMUST00000178005 107 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm27792-201ENSMUST00000184031 115 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm6060-201ENSMUST00000188671 251 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm25588-201ENSMUST00000082501 140 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Gm23907-201ENSMUST00000104595 189 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Gm26099-201ENSMUST00000157248 109 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Mir6997-201ENSMUST00000184313 71 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm24650-201ENSMUST00000157105 103 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm24718-201ENSMUST00000157521 136 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm22159-201ENSMUST00000158412 130 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm43626-201ENSMUST00000198575 162 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm14568-201ENSMUST00000119321 294 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm44491-201ENSMUST00000196794 96 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm43324-201ENSMUST00000197482 289 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm44464-201ENSMUST00000198010 138 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm35736-201ENSMUST00000203681 313 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Mir222-201ENSMUST00000083537 79 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
Shkbp1Q6P7W2 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Shkbp1Q6P7W2 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm44489-201ENSMUST00000104619 97 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm13588-201ENSMUST00000120026 135 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm13246-201ENSMUST00000120994 315 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm24246-201ENSMUST00000157315 132 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm23859-201ENSMUST00000158383 64 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm23509-201ENSMUST00000083080 160 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23950-201ENSMUST00000104026 129 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23951-201ENSMUST00000104029 132 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm26077-201ENSMUST00000104064 123 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm26150-201ENSMUST00000157426 151 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm25910-201ENSMUST00000157620 140 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23113-201ENSMUST00000158477 99 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm25367-201ENSMUST00000158846 106 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm22306-201ENSMUST00000082692 107 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm26074-201ENSMUST00000104063 129 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm6954-201ENSMUST00000117416 225 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm15069-201ENSMUST00000117792 192 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm15289-201ENSMUST00000117793 244 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm15068-201ENSMUST00000119796 192 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm23048-201ENSMUST00000157237 129 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm24559-201ENSMUST00000157519 121 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm22429-201ENSMUST00000158553 130 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm45522-201ENSMUST00000210784 166 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm26175-201ENSMUST00000083794 131 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 170.4 ms