Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Mir155-201ENSMUST00000083463 65 ntBASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Gm25628-201ENSMUST00000084002 105 ntBASIC2.39□□□□□ -2.03
Shkbp1Q6P7W2 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm22658-201ENSMUST00000104196 155 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm24375-201ENSMUST00000104397 132 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm14602-201ENSMUST00000118625 340 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm24475-201ENSMUST00000157435 143 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Mir8090-201ENSMUST00000185078 136 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm22055-201ENSMUST00000083388 107 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Mir489-201ENSMUST00000093599 107 ntBASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Shkbp1Q6P7W2 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm24877-201ENSMUST00000158779 116 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm23567-201ENSMUST00000178005 107 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm27792-201ENSMUST00000184031 115 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm6060-201ENSMUST00000188671 251 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm25588-201ENSMUST00000082501 140 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.37□□□□□ -2.03
Shkbp1Q6P7W2 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Gm23907-201ENSMUST00000104595 189 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Gm26099-201ENSMUST00000157248 109 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Mir6997-201ENSMUST00000184313 71 ntBASIC2.36□□□□□ -2.03
Shkbp1Q6P7W2 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Snora36b-201ENSMUST00000104383 132 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm24650-201ENSMUST00000157105 103 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm24718-201ENSMUST00000157521 136 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm22159-201ENSMUST00000158412 130 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm43626-201ENSMUST00000198575 162 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Shkbp1Q6P7W2 Gm14568-201ENSMUST00000119321 294 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm44491-201ENSMUST00000196794 96 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm43324-201ENSMUST00000197482 289 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm44464-201ENSMUST00000198010 138 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm35736-201ENSMUST00000203681 313 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Mir222-201ENSMUST00000083537 79 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.34□□□□□ -2.03
Shkbp1Q6P7W2 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
Shkbp1Q6P7W2 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
Shkbp1Q6P7W2 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm44489-201ENSMUST00000104619 97 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm13588-201ENSMUST00000120026 135 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm13246-201ENSMUST00000120994 315 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm24246-201ENSMUST00000157315 132 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm23859-201ENSMUST00000158383 64 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm23509-201ENSMUST00000083080 160 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.33□□□□□ -2.04
Shkbp1Q6P7W2 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm42718-201ENSMUST00000197319 2681 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23950-201ENSMUST00000104026 129 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23951-201ENSMUST00000104029 132 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm26077-201ENSMUST00000104064 123 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23980-201ENSMUST00000157135 158 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm26150-201ENSMUST00000157426 151 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm25910-201ENSMUST00000157620 140 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm23113-201ENSMUST00000158477 99 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm22947-201ENSMUST00000158559 91 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm25367-201ENSMUST00000158846 106 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Gm22306-201ENSMUST00000082692 107 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Shkbp1Q6P7W2 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm26074-201ENSMUST00000104063 129 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm6954-201ENSMUST00000117416 225 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm15069-201ENSMUST00000117792 192 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm15289-201ENSMUST00000117793 244 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm15068-201ENSMUST00000119796 192 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm23048-201ENSMUST00000157237 129 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm24559-201ENSMUST00000157519 121 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm22429-201ENSMUST00000158553 130 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm45522-201ENSMUST00000210784 166 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.31□□□□□ -2.04
Shkbp1Q6P7W2 Gm26175-201ENSMUST00000083794 131 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms