Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm23504-201ENSMUST00000158988 95 ntBASIC2.67□□□□□ -1.98
Trim28Q62318 Gm24813-201ENSMUST00000175310 84 ntBASIC2.67□□□□□ -1.98
Trim28Q62318 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.67□□□□□ -1.98
Trim28Q62318 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.67□□□□□ -1.98
Trim28Q62318 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
Trim28Q62318 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.67□□□□□ -1.98
Trim28Q62318 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trim28Q62318 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Trim28Q62318 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.66□□□□□ -1.98
Trim28Q62318 Gm26105-201ENSMUST00000157253 190 ntBASIC2.66□□□□□ -1.98
Trim28Q62318 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.66□□□□□ -1.98
Trim28Q62318 Gm18665-201ENSMUST00000189783 270 ntBASIC2.66□□□□□ -1.98
Trim28Q62318 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC2.66□□□□□ -1.98
Trim28Q62318 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.66□□□□□ -1.98
Trim28Q62318 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.66□□□□□ -1.98
Trim28Q62318 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.66□□□□□ -1.98
Trim28Q62318 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.65□□□□□ -1.98
Trim28Q62318 Gm24595-201ENSMUST00000122501 110 ntBASIC2.65□□□□□ -1.99
Trim28Q62318 Gm27668-201ENSMUST00000184188 120 ntBASIC2.65□□□□□ -1.99
Trim28Q62318 Gm22686-201ENSMUST00000082847 100 ntBASIC2.65□□□□□ -1.99
Trim28Q62318 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.65□□□□□ -1.99
Trim28Q62318 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.65□□□□□ -1.99
Trim28Q62318 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.65□□□□□ -1.99
Trim28Q62318 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim28Q62318 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trim28Q62318 Gm23109-201ENSMUST00000116867 126 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm22193-201ENSMUST00000116868 76 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm25059-201ENSMUST00000157367 117 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm24475-201ENSMUST00000157435 143 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm22483-201ENSMUST00000157986 274 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm22011-201ENSMUST00000158790 123 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Mir28b-201ENSMUST00000175399 80 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm37116-201ENSMUST00000195161 147 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm22055-201ENSMUST00000083388 107 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trim28Q62318 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.64□□□□□ -1.99
Trim28Q62318 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Trim28Q62318 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.64□□□□□ -1.99
Trim28Q62318 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm25022-201ENSMUST00000102205 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm23907-201ENSMUST00000104595 189 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm23718-201ENSMUST00000157350 307 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm25012-201ENSMUST00000158396 164 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm22069-201ENSMUST00000179911 107 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm28912-201ENSMUST00000189001 234 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Gm45791-201ENSMUST00000212908 352 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim28Q62318 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.63□□□□□ -1.99
Trim28Q62318 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Trim28Q62318 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.63□□□□□ -1.99
Trim28Q62318 Gm22031-201ENSMUST00000116945 126 ntBASIC2.62□□□□□ -1.99
Trim28Q62318 Gm22679-201ENSMUST00000116975 100 ntBASIC2.62□□□□□ -1.99
Trim28Q62318 Gm22790-201ENSMUST00000157229 129 ntBASIC2.62□□□□□ -1.99
Trim28Q62318 Gm44326-201ENSMUST00000198226 101 ntBASIC2.62□□□□□ -1.99
Trim28Q62318 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.62□□□□□ -1.99
Trim28Q62318 Gm24697-201ENSMUST00000083881 107 ntBASIC2.62□□□□□ -1.99
Trim28Q62318 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim28Q62318 Gm25828-201ENSMUST00000157087 95 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim28Q62318 Gm27792-201ENSMUST00000184031 115 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Gm42719-201ENSMUST00000197393 355 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Mir7232-201ENSMUST00000197929 74 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Mir201-201ENSMUST00000083470 66 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Mir340-201ENSMUST00000083483 98 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Mir369-201ENSMUST00000083627 79 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Gm26168-201ENSMUST00000083787 112 ntBASIC2.61□□□□□ -1.99
Trim28Q62318 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim28Q62318 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trim28Q62318 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Trim28Q62318 Gm44489-201ENSMUST00000104619 97 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Gm24177-201ENSMUST00000158927 131 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Gm22800-201ENSMUST00000175627 94 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Gm44976-201ENSMUST00000205543 261 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Gm44564-201ENSMUST00000207985 180 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Gm25589-201ENSMUST00000082502 166 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Gm24625-201ENSMUST00000082622 130 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim28Q62318 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.6□□□□□ -1.99
Trim28Q62318 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim28Q62318 Gm22486-201ENSMUST00000116815 137 ntBASIC2.59□□□□□ -1.99
Trim28Q62318 Gm22983-201ENSMUST00000158308 104 ntBASIC2.59□□□□□ -1.99
Trim28Q62318 Gm27934-201ENSMUST00000158795 63 ntBASIC2.59□□□□□ -1.99
Trim28Q62318 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.59□□□□□ -1.99
Trim28Q62318 Gm23038-201ENSMUST00000083873 104 ntBASIC2.59□□□□□ -1.99
Trim28Q62318 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Trim28Q62318 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.58□□□□□ -2
Trim28Q62318 Gm24277-201ENSMUST00000158661 104 ntBASIC2.58□□□□□ -2
Trim28Q62318 Mir6350-201ENSMUST00000183639 105 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms