Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm23375-201ENSMUST00000175407 83 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Mir6342-201ENSMUST00000183870 125 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm28343-201ENSMUST00000185386 112 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Mir721-201ENSMUST00000200230 88 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.74□□□□□ -2.53
Trav6d-4Q5R1I0 Gm23013-201ENSMUST00000104146 106 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm24799-201ENSMUST00000178431 79 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm22572-201ENSMUST00000082985 105 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm22421-201ENSMUST00000083058 107 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Gm45557-201ENSMUST00000210004 1651 ntBASIC-0.75□□□□□ -2.53
Trav6d-4Q5R1I0 Mir701-201ENSMUST00000102208 109 ntBASIC-0.76□□□□□ -2.53
Trav6d-4Q5R1I0 Gm24283-201ENSMUST00000104233 107 ntBASIC-0.76□□□□□ -2.53
Trav6d-4Q5R1I0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.76□□□□□ -2.53
Trav6d-4Q5R1I0 Gm38364-201ENSMUST00000191814 179 ntBASIC-0.76□□□□□ -2.53
Trav6d-4Q5R1I0 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.76□□□□□ -2.53
Trav6d-4Q5R1I0 Gm10172-201ENSMUST00000085929 558 ntBASIC-0.76□□□□□ -2.53
Trav6d-4Q5R1I0 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 AC116460.1-201ENSMUST00000219040 313 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Snora20-201ENSMUST00000082703 128 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Gm23093-201ENSMUST00000083450 102 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC-0.77□□□□□ -2.53
Trav6d-4Q5R1I0 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Gm23034-201ENSMUST00000158001 147 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Spanxn4-201ENSMUST00000172433 424 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 AC155712.1-201ENSMUST00000219704 160 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 AC164629.1-201ENSMUST00000220250 1113 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 AC133079.1-201ENSMUST00000220943 1881 ntBASIC-0.78□□□□□ -2.53
Trav6d-4Q5R1I0 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm14989-201ENSMUST00000120497 207 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm24595-201ENSMUST00000122501 110 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Ighv12-2-201ENSMUST00000191949 362 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 AC154506.3-201ENSMUST00000225417 213 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.79□□□□□ -2.54
Trav6d-4Q5R1I0 Mir1951-201ENSMUST00000157981 89 ntBASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 Gm28669-201ENSMUST00000188400 100 ntBASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 AC156790.3-201ENSMUST00000226200 254 ntBASIC-0.8□□□□□ -2.54
Trav6d-4Q5R1I0 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm26500-201ENSMUST00000101867 106 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23917-201ENSMUST00000175256 98 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm22851-201ENSMUST00000178741 94 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25074-201ENSMUST00000178782 94 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 CT025689.4-201ENSMUST00000225926 601 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 AC117202.2-201ENSMUST00000226491 1101 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25131-201ENSMUST00000082653 151 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.81□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 AC154994.1-201ENSMUST00000217395 302 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.82□□□□□ -2.54
Trav6d-4Q5R1I0 Mir706-201ENSMUST00000102262 84 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm26335-201ENSMUST00000178449 107 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm23523-201ENSMUST00000180190 107 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.83□□□□□ -2.54
Trav6d-4Q5R1I0 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms