Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Trav3-3Q5R1C3 Gm23024-201ENSMUST00000158770 292 ntBASIC0.33□□□□□ -2.36
Trav3-3Q5R1C3 Gm26073-201ENSMUST00000179906 127 ntBASIC0.33□□□□□ -2.36
Trav3-3Q5R1C3 Gm44057-201ENSMUST00000204547 96 ntBASIC0.33□□□□□ -2.36
Trav3-3Q5R1C3 Gm14946-201ENSMUST00000119859 296 ntBASIC0.32□□□□□ -2.36
Trav3-3Q5R1C3 Gm23982-201ENSMUST00000157141 106 ntBASIC0.32□□□□□ -2.36
Trav3-3Q5R1C3 Gm34015-201ENSMUST00000194908 451 ntBASIC0.32□□□□□ -2.36
Trav3-3Q5R1C3 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.32□□□□□ -2.36
Trav3-3Q5R1C3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.32□□□□□ -2.36
Trav3-3Q5R1C3 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm25878-201ENSMUST00000104327 93 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm26301-201ENSMUST00000104813 95 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm26274-201ENSMUST00000157103 321 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm22801-201ENSMUST00000175624 84 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm23571-201ENSMUST00000180073 127 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm44462-201ENSMUST00000199696 129 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 AC154296.2-201ENSMUST00000214696 545 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Mir451a-201ENSMUST00000093557 72 ntBASIC0.31□□□□□ -2.36
Trav3-3Q5R1C3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm22321-201ENSMUST00000157152 104 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm23640-201ENSMUST00000157860 104 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm23853-201ENSMUST00000158375 104 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Mir3968-201ENSMUST00000175355 100 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Mir7052-201ENSMUST00000184821 65 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm44211-201ENSMUST00000204867 145 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Snora20-201ENSMUST00000082703 128 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm24453-201ENSMUST00000083346 76 ntBASIC0.3□□□□□ -2.36
Trav3-3Q5R1C3 Gm14671-201ENSMUST00000121790 262 ntBASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 Gm22163-201ENSMUST00000158408 135 ntBASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 Gm16307-201ENSMUST00000161269 210 ntBASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 Gm44959-201ENSMUST00000209127 231 ntBASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 AC129085.1-201ENSMUST00000225263 165 ntBASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 Gm22364-201ENSMUST00000083097 98 ntBASIC0.29□□□□□ -2.36
Trav3-3Q5R1C3 Gm22021-201ENSMUST00000104353 107 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm12837-201ENSMUST00000120131 373 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm24015-201ENSMUST00000157725 232 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm24501-201ENSMUST00000158452 62 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm23416-201ENSMUST00000175520 95 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm27997-201ENSMUST00000184942 69 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm43563-201ENSMUST00000196761 198 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm45544-201ENSMUST00000211130 88 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm24624-201ENSMUST00000082617 164 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm23377-201ENSMUST00000082943 126 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Gm24204-201ENSMUST00000082950 107 ntBASIC0.28□□□□□ -2.36
Trav3-3Q5R1C3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm22469-201ENSMUST00000104118 133 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm24211-201ENSMUST00000158264 107 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Mir1933-201ENSMUST00000158930 88 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm38183-201ENSMUST00000193189 205 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm44055-201ENSMUST00000204376 247 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm8219-201ENSMUST00000218309 242 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm24316-201ENSMUST00000083041 107 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm23845-201ENSMUST00000083834 152 ntBASIC0.27□□□□□ -2.37
Trav3-3Q5R1C3 Gm25538-201ENSMUST00000101943 107 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Gm6985-201ENSMUST00000121255 271 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Gm26090-201ENSMUST00000157897 128 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Gm25044-201ENSMUST00000158603 104 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Mir6350-201ENSMUST00000183639 105 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Mir30a-201ENSMUST00000083471 71 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.26□□□□□ -2.37
Trav3-3Q5R1C3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm6272-201ENSMUST00000121256 171 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm26415-201ENSMUST00000157673 292 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm22706-201ENSMUST00000157907 112 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm22097-201ENSMUST00000157929 278 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm24634-201ENSMUST00000158672 107 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Gm27656-201ENSMUST00000185055 80 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Mir8090-201ENSMUST00000185078 136 ntBASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.25□□□□□ -2.37
Trav3-3Q5R1C3 Mir547-201ENSMUST00000102051 78 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Gm13801-201ENSMUST00000120750 160 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Gm45541-201ENSMUST00000210443 54 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Snora19-201ENSMUST00000082962 132 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Gm23242-201ENSMUST00000083055 107 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Gm23658-201ENSMUST00000083233 132 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.24□□□□□ -2.37
Trav3-3Q5R1C3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Trav3-3Q5R1C3 Gm26255-201ENSMUST00000122492 103 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms