Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm25402-201ENSMUST00000082966 131 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Mir488-201ENSMUST00000093595 109 ntBASIC2.5□□□□□ -2.01
Rnf180Q3U827 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.49□□□□□ -2.01
Rnf180Q3U827 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Rnf180Q3U827 Gm9156-201ENSMUST00000189660 463 ntBASIC2.49□□□□□ -2.01
Rnf180Q3U827 Gm44338-201ENSMUST00000198614 110 ntBASIC2.49□□□□□ -2.01
Rnf180Q3U827 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.49□□□□□ -2.01
Rnf180Q3U827 Mir300-201ENSMUST00000083485 79 ntBASIC2.49□□□□□ -2.01
Rnf180Q3U827 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Rnf180Q3U827 Gm22850-201ENSMUST00000157714 82 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm25371-201ENSMUST00000158162 101 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm24167-201ENSMUST00000177733 124 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm24028-201ENSMUST00000178991 124 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm3724-201ENSMUST00000197957 349 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm42988-201ENSMUST00000198116 225 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.48□□□□□ -2.01
Rnf180Q3U827 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.48□□□□□ -2.01
Rnf180Q3U827 Gm22683-201ENSMUST00000082854 137 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Mir429-201ENSMUST00000083493 83 ntBASIC2.48□□□□□ -2.01
Rnf180Q3U827 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Rnf180Q3U827 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Rnf180Q3U827 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm22967-201ENSMUST00000157956 239 ntBASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm27851-201ENSMUST00000183529 63 ntBASIC2.47□□□□□ -2.01
Rnf180Q3U827 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm19257-201ENSMUST00000186121 183 ntBASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Rnf180Q3U827 Mir93-201ENSMUST00000083593 88 ntBASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm25628-201ENSMUST00000084002 105 ntBASIC2.47□□□□□ -2.01
Rnf180Q3U827 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.46□□□□□ -2.01
Rnf180Q3U827 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm22469-201ENSMUST00000104118 133 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm26301-201ENSMUST00000104813 95 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Mir293-201ENSMUST00000104841 80 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm14588-201ENSMUST00000119895 172 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm24054-201ENSMUST00000158619 105 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm22139-201ENSMUST00000158747 105 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm22093-201ENSMUST00000158980 111 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm29308-201ENSMUST00000188863 315 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm28537-201ENSMUST00000189026 315 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm29631-201ENSMUST00000191065 315 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.46□□□□□ -2.02
Rnf180Q3U827 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Gm24044-201ENSMUST00000083107 156 ntBASIC2.46□□□□□ -2.02
Rnf180Q3U827 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Rnf180Q3U827 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.45□□□□□ -2.02
Rnf180Q3U827 Gm22554-201ENSMUST00000157798 147 ntBASIC2.45□□□□□ -2.02
Rnf180Q3U827 Gm22768-201ENSMUST00000158366 153 ntBASIC2.45□□□□□ -2.02
Rnf180Q3U827 Gm24676-201ENSMUST00000158758 75 ntBASIC2.45□□□□□ -2.02
Rnf180Q3U827 Mir3086-201ENSMUST00000175072 87 ntBASIC2.45□□□□□ -2.02
Rnf180Q3U827 Gm38364-201ENSMUST00000191814 179 ntBASIC2.45□□□□□ -2.02
Rnf180Q3U827 Gm24902-201ENSMUST00000158126 123 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm24900-201ENSMUST00000158128 134 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm23337-201ENSMUST00000158959 118 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm28409-201ENSMUST00000187064 103 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm44470-201ENSMUST00000203913 142 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm44057-201ENSMUST00000204547 96 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm18502-201ENSMUST00000218679 199 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.44□□□□□ -2.02
Rnf180Q3U827 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Rnf180Q3U827 Gm14882-201ENSMUST00000117216 218 ntBASIC2.43□□□□□ -2.02
Rnf180Q3U827 Gm26291-201ENSMUST00000158889 137 ntBASIC2.43□□□□□ -2.02
Rnf180Q3U827 Gm23966-201ENSMUST00000179823 107 ntBASIC2.43□□□□□ -2.02
Rnf180Q3U827 Mir7678-201ENSMUST00000185076 71 ntBASIC2.43□□□□□ -2.02
Rnf180Q3U827 Gm23239-201ENSMUST00000083006 181 ntBASIC2.43□□□□□ -2.02
Rnf180Q3U827 Mir301-201ENSMUST00000083655 86 ntBASIC2.43□□□□□ -2.02
Rnf180Q3U827 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Rnf180Q3U827 Gm22761-201ENSMUST00000102278 96 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm24375-201ENSMUST00000104397 132 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm23320-201ENSMUST00000104462 127 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm23033-201ENSMUST00000157996 134 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm23854-201ENSMUST00000158378 108 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm26360-201ENSMUST00000158872 103 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm24333-201ENSMUST00000175101 84 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm27330-201ENSMUST00000184689 132 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm37557-201ENSMUST00000191640 139 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Snord43-201ENSMUST00000199549 108 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm45522-201ENSMUST00000210784 166 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm23722-201ENSMUST00000083002 130 ntBASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC2.42□□□□□ -2.02
Rnf180Q3U827 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Rnf180Q3U827 Gm22373-201ENSMUST00000104584 89 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gm25323-201ENSMUST00000122555 103 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gm22279-201ENSMUST00000157200 93 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gm26337-201ENSMUST00000178000 79 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Mir6962-201ENSMUST00000199512 63 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gm42506-201ENSMUST00000202009 150 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 AL627387.1-201ENSMUST00000226063 250 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gm26454-201ENSMUST00000082682 107 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gm10813-201ENSMUST00000099936 90 ntBASIC2.41□□□□□ -2.02
Rnf180Q3U827 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Rnf180Q3U827 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 194.3 ms